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DNAA - RNPA
UniProt: P03004 - P0A7Y8
Length: 586
Sequences: 370
Seq/Len: 0.65
I_Prob: 0.08

DNAA - Chromosomal replication initiator protein DnaA
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DNAA
RNPA - Ribonuclease P protein component
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RNPA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
154_A 52_A 1.80 0.08
208_Q 57_R 1.39 0.03
374_V 85_F 1.36 0.02
270_R 25_P 1.24 0.02
399_R 66_K 1.21 0.01
295_E 12_L 1.21 0.01
413_L 53_K 1.20 0.01
358_F 34_T 1.19 0.01
465_L 11_R 1.19 0.01
81_K 87_V 1.14 0.01
412_A 34_T 1.12 0.01
380_Q 66_K 1.11 0.01
132_V 21_V 1.10 0.01
310_A 21_V 1.10 0.01
187_N 22_F 1.09 0.01
139_D 26_Q 1.09 0.01
153_A 60_H 1.09 0.01
376_I 88_V 1.07 0.01
319_G 60_H 1.07 0.01
380_Q 33_I 1.06 0.01
130_S 17_Q 1.06 0.01
169_F 18_F 1.05 0.01
397_K 66_K 1.05 0.01
404_A 76_R 1.04 0.01
44_N 73_F 1.03 0.01
401_R 86_V 1.03 0.01
240_F 22_F 1.02 0.01
56_L 80_L 1.02 0.01
262_Q 55_N 1.02 0.01
280_D 65_I 1.02 0.01
387_Y 97_D 1.01 0.01
265_I 47_I 1.01 0.01
417_L 11_R 1.00 0.01
245_R 66_K 0.99 0.01
170_L 31_P 0.99 0.01
184_A 59_A 0.99 0.01
170_L 60_H 0.99 0.01
290_L 60_H 0.99 0.01
358_F 59_A 0.99 0.01
231_A 17_Q 0.99 0.01
199_V 88_V 0.98 0.01
442_R 7_P 0.98 0.01
359_V 51_V 0.96 0.01
387_Y 43_G 0.96 0.01
391_V 82_A 0.96 0.01
234_I 85_F 0.96 0.01
357_D 51_V 0.96 0.01
63_L 94_A 0.96 0.01
301_T 56_V 0.95 0.01
211_V 25_P 0.95 0.01
228_S 51_V 0.94 0.01
174_T 31_P 0.94 0.01
299_L 66_K 0.94 0.01
387_Y 84_D 0.94 0.01
162_G 51_V 0.94 0.01
68_G 19_T 0.94 0.01
451_S 21_V 0.94 0.01
28_P 70_R 0.93 0.01
384_A 95_D 0.93 0.01
423_P 11_R 0.93 0.01
240_F 86_V 0.93 0.01
55_Y 73_F 0.93 0.01
48_L 64_R 0.93 0.01
265_I 8_R 0.93 0.01
465_L 102_S 0.92 0.01
461_L 39_L 0.92 0.01
266_L 100_A 0.92 0.01
401_R 108_L 0.92 0.01
137_T 56_V 0.91 0.01
40_L 50_T 0.91 0.01
342_R 29_G 0.91 0.01
139_D 42_L 0.91 0.01
5_L 80_L 0.91 0.01
355_T 28_A 0.91 0.01
161_P 27_R 0.90 0.01
168_L 56_V 0.90 0.01
347_A 31_P 0.90 0.01
185_V 8_R 0.90 0.01
220_E 103_E 0.90 0.01
320_E 38_R 0.90 0.01
213_A 12_L 0.90 0.01
394_L 16_S 0.90 0.01
272_P 18_F 0.89 0.01
406_P 74_R 0.89 0.01
185_V 73_F 0.89 0.01
421_S 11_R 0.89 0.01
241_A 66_K 0.88 0.01
214_L 49_L 0.88 0.01
186_G 11_R 0.88 0.01
36_N 88_V 0.88 0.01
449_E 26_Q 0.88 0.01
250_F 51_V 0.87 0.00
387_Y 46_R 0.87 0.00
250_F 48_G 0.87 0.00
397_K 63_N 0.86 0.00
412_A 57_R 0.86 0.00
189_I 66_K 0.86 0.00
461_L 87_V 0.86 0.00
465_L 49_L 0.86 0.00
404_A 12_L 0.86 0.00
446_Q 81_P 0.85 0.00
440_A 11_R 0.85 0.00
184_A 63_N 0.85 0.00
15_D 33_I 0.85 0.00
450_E 90_K 0.85 0.00
168_L 89_A 0.85 0.00
139_D 100_A 0.85 0.00
320_E 39_L 0.85 0.00
353_A 91_K 0.85 0.00
183_H 68_L 0.85 0.00
182_L 50_T 0.85 0.00
223_K 22_F 0.84 0.00
184_A 66_K 0.84 0.00
279_E 48_G 0.84 0.00
353_A 43_G 0.84 0.00
139_D 47_I 0.84 0.00
199_V 73_F 0.84 0.00
429_F 11_R 0.84 0.00
146_S 45_P 0.84 0.00
381_K 106_E 0.83 0.00
422_L 52_A 0.83 0.00
275_I 22_F 0.83 0.00
324_F 27_R 0.83 0.00
217_N 56_V 0.83 0.00
182_L 31_P 0.82 0.00
197_K 65_I 0.82 0.00
270_R 88_V 0.82 0.00
386_Y 66_K 0.82 0.00
146_S 32_Q 0.82 0.00
389_I 75_L 0.82 0.00
195_N 85_F 0.82 0.00
307_M 60_H 0.82 0.00
461_L 89_A 0.82 0.00
266_L 98_N 0.82 0.00
435_T 11_R 0.82 0.00
4_S 65_I 0.82 0.00
420_H 77_Q 0.82 0.00
321_V 108_L 0.82 0.00
14_Q 92_G 0.82 0.00
444_I 42_L 0.81 0.00
465_L 23_Q 0.81 0.00
256_A 65_I 0.81 0.00
218_A 86_V 0.81 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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