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DPO3E - RNH
UniProt: P03007 - P0A7Y4
Length: 398
Sequences: 249
Seq/Len: 0.64
I_Prob: 0.00

DPO3E - DNA polymerase III subunit epsilon
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: DPO3E
RNH - Ribonuclease HI
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RNH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
104_I 24_A 1.43 0.00
230_D 116_I 1.31 0.00
97_I 26_L 1.28 0.00
35_A 88_R 1.27 0.00
40_N 82_I 1.25 0.00
135_R 83_H 1.24 0.00
60_P 27_R 1.22 0.00
101_A 117_K 1.19 0.00
220_E 116_I 1.18 0.00
42_R 55_A 1.16 0.00
10_V 102_D 1.10 0.00
111_F 87_K 1.10 0.00
92_G 67_L 1.09 0.00
89_Y 111_L 1.09 0.00
175_Y 35_F 1.09 0.00
10_V 88_R 1.07 0.00
29_K 92_T 1.06 0.00
168_A 55_A 1.04 0.00
169_Q 23_G 1.02 0.00
112_S 95_K 1.02 0.00
173_E 61_E 1.01 0.00
9_I 122_K 1.01 0.00
18_M 133_C 1.00 0.00
108_D 75_R 1.00 0.00
114_L 62_H 1.00 0.00
31_I 86_K 0.99 0.00
59_D 129_E 0.98 0.00
185_M 35_F 0.98 0.00
218_T 78_I 0.98 0.00
180_G 79_T 0.97 0.00
184_S 7_I 0.97 0.00
170_I 75_R 0.97 0.00
128_T 67_L 0.97 0.00
42_R 57_E 0.96 0.00
96_V 25_I 0.95 0.00
143_N 63_C 0.94 0.00
222_I 29_R 0.94 0.00
93_A 93_A 0.93 0.00
154_I 7_I 0.93 0.00
31_I 108_D 0.92 0.00
168_A 51_A 0.92 0.00
19_N 82_I 0.91 0.00
212_L 96_K 0.91 0.00
232_V 116_I 0.91 0.00
46_N 5_V 0.90 0.00
74_L 29_R 0.90 0.00
80_A 35_F 0.90 0.00
176_L 127_H 0.89 0.00
184_S 5_V 0.89 0.00
66_H 23_G 0.89 0.00
10_V 96_K 0.88 0.00
226_E 49_L 0.88 0.00
108_D 72_Q 0.87 0.00
112_S 60_K 0.87 0.00
154_I 88_R 0.87 0.00
199_E 55_A 0.87 0.00
124_F 52_A 0.87 0.00
73_L 27_R 0.87 0.00
177_A 65_V 0.86 0.00
58_V 87_K 0.86 0.00
135_R 111_L 0.86 0.00
215_V 29_R 0.86 0.00
29_K 40_T 0.86 0.00
71_E 142_M 0.86 0.00
144_S 65_V 0.86 0.00
36_V 126_G 0.86 0.00
42_R 122_K 0.86 0.00
101_A 28_Y 0.84 0.00
10_V 26_L 0.84 0.00
69_A 111_L 0.83 0.00
168_A 115_Q 0.83 0.00
228_R 122_K 0.83 0.00
135_R 82_I 0.83 0.00
105_G 91_K 0.82 0.00
91_R 112_G 0.82 0.00
160_T 135_E 0.82 0.00
80_A 94_D 0.82 0.00
158_K 74_V 0.81 0.00
224_A 33_K 0.81 0.00
94_E 79_T 0.81 0.00
168_A 87_K 0.81 0.00
92_G 91_K 0.81 0.00
61_E 39_Y 0.81 0.00
19_N 87_K 0.81 0.00
9_I 28_Y 0.81 0.00
43_L 101_V 0.80 0.00
126_K 29_R 0.80 0.00
180_G 23_G 0.80 0.00
91_R 116_I 0.80 0.00
209_A 23_G 0.80 0.00
135_R 50_M 0.80 0.00
223_A 24_A 0.80 0.00
59_D 132_R 0.80 0.00
56_R 69_T 0.80 0.00
31_I 8_F 0.80 0.00
217_A 38_G 0.80 0.00
30_I 97_P 0.79 0.00
127_V 99_K 0.79 0.00
128_T 68_S 0.79 0.00
38_V 101_V 0.79 0.00
94_E 129_E 0.79 0.00
126_K 95_K 0.79 0.00
173_E 74_V 0.78 0.00
68_I 68_S 0.78 0.00
105_G 32_E 0.78 0.00
118_I 34_T 0.78 0.00
236_G 82_I 0.78 0.00
164_A 23_G 0.78 0.00
219_D 106_R 0.78 0.00
135_R 52_A 0.78 0.00
78_T 61_E 0.78 0.00
228_R 76_Q 0.78 0.00
200_A 112_G 0.78 0.00
8_Q 31_R 0.78 0.00
88_D 67_L 0.78 0.00
217_A 101_V 0.78 0.00
192_E 88_R 0.77 0.00
42_R 106_R 0.77 0.00
143_N 14_L 0.77 0.00
154_I 27_R 0.77 0.00
93_A 97_P 0.77 0.00
231_L 12_S 0.77 0.00
191_G 146_L 0.77 0.00
113_L 30_G 0.77 0.00
55_D 93_A 0.77 0.00
38_V 27_R 0.76 0.00
243_A 88_R 0.76 0.00
204_R 87_K 0.76 0.00
73_L 6_E 0.76 0.00
26_E 96_K 0.76 0.00
237_G 75_R 0.76 0.00
69_A 61_E 0.75 0.00
151_R 27_R 0.75 0.00
214_V 23_G 0.75 0.00
56_R 5_V 0.75 0.00
96_V 140_A 0.74 0.00
80_A 132_R 0.74 0.00
63_F 25_I 0.74 0.00
217_A 95_K 0.74 0.00
232_V 22_Y 0.74 0.00
177_A 61_E 0.74 0.00
184_S 23_G 0.74 0.00
137_M 55_A 0.74 0.00
65_V 126_G 0.74 0.00
185_M 108_D 0.74 0.00
111_F 78_I 0.73 0.00
137_M 122_K 0.73 0.00
95_L 69_T 0.73 0.00
180_G 76_Q 0.73 0.00
10_V 84_N 0.73 0.00
165_L 107_L 0.73 0.00
210_S 5_V 0.73 0.00
160_T 74_V 0.73 0.00
122_N 96_K 0.73 0.00
136_K 50_M 0.73 0.00
195_Q 89_G 0.72 0.00
65_V 108_D 0.72 0.00
101_A 138_R 0.72 0.00
66_H 86_K 0.72 0.00
226_E 33_K 0.72 0.00
11_L 55_A 0.72 0.00
178_M 127_H 0.72 0.00
71_E 121_V 0.72 0.00
153_E 61_E 0.72 0.00
112_S 35_F 0.72 0.00
219_D 50_M 0.72 0.00
209_A 60_K 0.72 0.00
236_G 5_V 0.72 0.00
135_R 55_A 0.72 0.00
89_Y 54_V 0.72 0.00
64_G 125_A 0.72 0.00
94_E 27_R 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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