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UMUC - UMUD
UniProt: P04152 - P0AG11
Length: 561
Sequences: 572
Seq/Len: 1.04
I_Prob: 1.00

UMUC - Protein UmuC
Paralog alert: 0.66 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: DPO4 UMUC
UMUD - Protein UmuD
Paralog alert: 0.49 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: COHE LEXA UMUD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
415_S 38_I 3.44 1.00
421_V 54_V 1.83 0.86
132_H 76_S 1.81 0.85
404_R 33_Y 1.60 0.72
183_D 127_V 1.52 0.66
78_A 34_V 1.46 0.60
140_A 56_A 1.43 0.57
200_I 87_I 1.28 0.41
74_Y 33_Y 1.21 0.34
118_D 45_I 1.20 0.33
128_L 87_I 1.15 0.29
127_V 119_I 1.13 0.27
415_S 96_V 1.12 0.26
270_Y 56_A 1.10 0.24
23_W 86_V 1.06 0.21
109_G 114_Y 1.01 0.17
418_L 50_A 1.01 0.17
277_K 35_E 0.97 0.14
210_D 125_L 0.95 0.14
90_E 90_V 0.95 0.13
245_Q 52_Y 0.94 0.13
132_H 24_C 0.93 0.12
100_I 28_S 0.93 0.12
420_R 56_A 0.92 0.12
360_L 69_G 0.92 0.12
419_L 54_V 0.91 0.11
75_E 33_Y 0.91 0.11
407_L 72_L 0.91 0.11
175_L 63_D 0.91 0.11
224_R 33_Y 0.91 0.11
420_R 57_S 0.89 0.10
419_L 74_V 0.89 0.10
233_P 38_I 0.89 0.10
93_P 58_G 0.89 0.10
189_R 80_A 0.89 0.10
38_I 133_H 0.87 0.09
415_S 71_L 0.87 0.09
287_F 136_K 0.86 0.09
292_I 121_S 0.86 0.09
388_T 52_Y 0.85 0.09
290_T 42_Q 0.85 0.08
319_S 45_I 0.83 0.08
297_F 24_C 0.83 0.07
347_L 88_A 0.83 0.07
263_M 73_I 0.82 0.07
407_L 103_P 0.82 0.07
181_V 88_A 0.82 0.07
274_A 88_A 0.81 0.07
212_R 112_S 0.81 0.07
266_A 96_V 0.80 0.07
404_R 31_A 0.80 0.07
319_S 71_L 0.80 0.07
322_I 89_A 0.80 0.06
417_D 48_P 0.79 0.06
305_G 80_A 0.79 0.06
254_G 88_A 0.78 0.06
118_D 114_Y 0.78 0.06
183_D 104_T 0.78 0.06
89_E 87_I 0.78 0.06
421_V 63_D 0.77 0.06
127_V 73_I 0.77 0.06
357_Q 48_P 0.77 0.06
332_A 74_V 0.77 0.06
220_V 29_P 0.77 0.06
344_G 45_I 0.77 0.06
275_A 56_A 0.77 0.06
323_I 117_I 0.76 0.05
248_I 127_V 0.76 0.05
419_L 94_F 0.76 0.05
270_Y 33_Y 0.76 0.05
282_H 68_D 0.75 0.05
410_R 85_I 0.75 0.05
27_V 74_V 0.75 0.05
155_K 104_T 0.75 0.05
286_R 80_A 0.75 0.05
59_K 81_S 0.75 0.05
90_E 92_G 0.74 0.05
155_K 87_I 0.74 0.05
277_K 26_F 0.74 0.05
81_S 40_L 0.74 0.05
293_K 22_V 0.74 0.05
334_W 103_P 0.74 0.05
267_I 117_I 0.74 0.05
198_M 55_K 0.73 0.05
200_I 78_I 0.73 0.05
136_G 69_G 0.73 0.05
74_Y 30_A 0.73 0.05
229_L 92_G 0.73 0.04
168_N 74_V 0.73 0.04
40_R 32_D 0.73 0.04
187_I 100_Q 0.73 0.04
1_M 94_F 0.72 0.04
152_A 128_F 0.72 0.04
124_R 16_P 0.72 0.04
190_R 94_F 0.72 0.04
392_A 108_I 0.72 0.04
127_V 133_H 0.72 0.04
218_F 121_S 0.72 0.04
93_P 135_V 0.71 0.04
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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