GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
FLIM - FLIQ
UniProt: P06974 - P0AC07
Length: 423
Sequences: 426
Seq/Len: 1.04
I_Prob: 0.17

FLIM - Flagellar motor switch protein FliM
Paralog alert: 0.23 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: FLIM
FLIQ - Flagellar biosynthetic protein FliQ
Paralog alert: 0.34 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
284_L 57_A 1.67 0.17
294_A 36_S 1.40 0.08
90_H 70_L 1.37 0.07
317_I 9_M 1.35 0.07
217_I 45_N 1.32 0.06
283_V 50_S 1.30 0.06
188_F 54_K 1.29 0.06
97_P 10_G 1.28 0.06
202_T 14_M 1.26 0.05
224_I 56_I 1.22 0.05
255_Q 10_G 1.21 0.04
206_V 34_I 1.20 0.04
316_R 77_V 1.20 0.04
294_A 35_I 1.20 0.04
153_V 76_Y 1.19 0.04
277_K 61_A 1.18 0.04
283_V 12_E 1.17 0.04
203_P 50_S 1.16 0.04
3_D 84_L 1.16 0.04
120_P 54_K 1.15 0.04
197_D 35_I 1.14 0.04
287_E 64_I 1.13 0.04
284_L 61_A 1.12 0.03
265_F 69_M 1.12 0.03
317_I 56_I 1.09 0.03
188_F 23_P 1.08 0.03
284_L 31_T 1.08 0.03
71_N 87_I 1.06 0.03
219_L 2_T 1.05 0.03
221_F 62_I 1.05 0.03
275_I 16_V 1.05 0.03
203_P 38_L 1.05 0.03
128_D 18_L 1.04 0.03
284_L 37_I 1.03 0.03
73_L 70_L 1.03 0.02
9_A 88_I 1.03 0.02
258_Q 56_I 1.03 0.02
262_V 65_A 1.02 0.02
54_L 12_E 1.02 0.02
84_I 35_I 1.02 0.02
321_I 6_V 1.02 0.02
265_F 20_L 1.01 0.02
75_R 8_M 1.01 0.02
280_P 81_F 1.01 0.02
67_M 9_M 1.00 0.02
215_F 45_N 1.00 0.02
209_G 74_L 1.00 0.02
187_K 52_I 1.00 0.02
187_K 69_M 0.99 0.02
279_N 60_I 0.99 0.02
75_R 75_D 0.98 0.02
296_V 43_Q 0.98 0.02
57_I 9_M 0.98 0.02
168_A 60_I 0.97 0.02
319_H 62_I 0.97 0.02
239_S 26_L 0.97 0.02
81_V 66_G 0.97 0.02
71_N 41_A 0.97 0.02
76_S 16_V 0.96 0.02
266_A 37_I 0.96 0.02
87_Q 76_Y 0.96 0.02
264_N 23_P 0.95 0.02
304_S 25_L 0.95 0.02
271_R 24_L 0.95 0.02
291_R 12_E 0.94 0.02
276_L 57_A 0.94 0.02
321_I 49_L 0.94 0.02
24_E 57_A 0.93 0.02
2_G 52_I 0.93 0.02
79_I 25_L 0.92 0.02
40_P 11_T 0.92 0.02
311_G 58_V 0.92 0.02
37_P 24_L 0.92 0.02
3_D 13_A 0.91 0.02
287_E 80_L 0.91 0.01
128_D 29_L 0.90 0.01
9_A 19_A 0.90 0.01
274_Q 19_A 0.90 0.01
206_V 8_M 0.90 0.01
293_I 70_L 0.89 0.01
212_T 31_T 0.89 0.01
224_I 10_G 0.88 0.01
11_I 8_M 0.88 0.01
129_N 41_A 0.88 0.01
200_V 6_V 0.88 0.01
292_I 18_L 0.88 0.01
266_A 69_M 0.87 0.01
20_E 31_T 0.87 0.01
225_E 4_E 0.87 0.01
324_I 76_Y 0.87 0.01
278_L 9_M 0.87 0.01
305_Q 55_I 0.86 0.01
127_V 41_A 0.86 0.01
168_A 28_A 0.86 0.01
116_V 29_L 0.86 0.01
316_R 2_T 0.86 0.01
123_V 41_A 0.85 0.01
274_Q 71_N 0.85 0.01
239_S 69_M 0.85 0.01
233_N 52_I 0.85 0.01
128_D 22_A 0.84 0.01
198_I 37_I 0.84 0.01
298_G 62_I 0.83 0.01
69_L 6_V 0.83 0.01
200_V 11_T 0.83 0.01
269_S 81_F 0.83 0.01
163_E 21_A 0.83 0.01
279_N 17_A 0.83 0.01
217_I 76_Y 0.83 0.01
210_N 52_I 0.83 0.01
26_T 63_I 0.83 0.01
4_S 27_V 0.83 0.01
317_I 38_L 0.83 0.01
278_L 19_A 0.83 0.01
250_L 29_L 0.82 0.01
204_F 58_V 0.82 0.01
278_L 72_L 0.82 0.01
208_I 50_S 0.82 0.01
105_I 76_Y 0.82 0.01
269_S 9_M 0.82 0.01
208_I 84_L 0.82 0.01
266_A 23_P 0.82 0.01
153_V 41_A 0.81 0.01
270_L 24_L 0.81 0.01
298_G 78_R 0.81 0.01
128_D 10_G 0.81 0.01
120_P 76_Y 0.81 0.01
172_I 45_N 0.81 0.01
250_L 16_V 0.81 0.01
131_F 26_L 0.81 0.01
65_F 44_I 0.81 0.01
39_D 88_I 0.81 0.01
180_V 9_M 0.81 0.01
5_I 69_M 0.81 0.01
219_L 31_T 0.81 0.01
128_D 66_G 0.81 0.01
7_S 88_I 0.80 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0403 seconds.