GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
CHEA - CHEW
UniProt: P07363 - P0A964
Length: 821
Sequences: 1084
Seq/Len: 1.37
I_Prob: 1.00

CHEA - Chemotaxis protein CheA
Paralog alert: 0.28 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CHEA
CHEW - Chemotaxis protein CheW
Paralog alert: 0.58 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: CHEW
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
522_E 47_R 3.10 1.00
279_G 38_E 1.64 0.83
329_M 131_L 1.30 0.55
631_V 58_V 1.27 0.52
560_P 108_V 1.23 0.47
96_D 60_N 1.23 0.47
625_I 60_N 1.18 0.42
489_V 90_V 1.07 0.31
623_A 51_T 1.07 0.31
556_G 136_A 1.07 0.30
280_E 60_N 1.06 0.29
634_I 60_N 1.04 0.27
279_G 40_R 1.03 0.26
370_I 34_L 1.00 0.24
356_V 31_I 1.00 0.24
7_D 90_V 1.00 0.23
76_A 24_L 0.98 0.22
602_Q 28_E 0.98 0.22
583_V 30_G 0.98 0.22
386_I 121_E 0.98 0.22
608_K 60_N 0.98 0.22
466_T 111_L 0.97 0.21
348_G 23_T 0.96 0.20
367_I 47_R 0.96 0.20
505_L 99_G 0.96 0.20
62_L 147_I 0.96 0.20
286_S 20_L 0.95 0.20
317_L 72_R 0.94 0.19
620_I 58_V 0.94 0.19
274_L 145_V 0.93 0.18
604_Q 20_L 0.93 0.18
382_L 54_F 0.93 0.18
71_N 90_V 0.93 0.18
604_Q 41_G 0.93 0.18
378_V 30_G 0.92 0.17
326_M 108_V 0.92 0.17
457_P 142_L 0.91 0.17
405_L 91_L 0.91 0.17
335_R 71_L 0.91 0.16
283_I 67_P 0.90 0.16
49_S 40_R 0.90 0.16
69_M 146_N 0.90 0.16
589_G 146_N 0.90 0.15
267_A 48_I 0.89 0.15
594_L 71_L 0.89 0.15
537_P 41_G 0.89 0.15
601_G 67_P 0.89 0.15
361_E 67_P 0.89 0.15
569_N 50_N 0.88 0.14
324_I 87_V 0.87 0.14
46_A 147_I 0.87 0.14
416_I 58_V 0.87 0.14
604_Q 87_V 0.87 0.14
347_L 66_V 0.87 0.14
329_M 21_V 0.87 0.14
378_V 146_N 0.86 0.14
342_D 27_E 0.86 0.13
321_V 87_V 0.86 0.13
36_D 58_V 0.86 0.13
393_L 118_P 0.85 0.12
512_L 48_I 0.85 0.12
386_I 22_F 0.85 0.12
364_K 19_F 0.85 0.12
62_L 68_I 0.84 0.12
479_K 131_L 0.84 0.12
329_M 59_T 0.84 0.12
622_A 62_R 0.84 0.12
285_Q 27_E 0.84 0.12
102_L 142_L 0.84 0.12
601_G 107_D 0.84 0.12
139_T 78_V 0.84 0.12
510_A 33_I 0.83 0.12
121_Q 154_E 0.83 0.12
236_P 114_E 0.83 0.12
531_V 92_N 0.83 0.12
403_L 131_L 0.83 0.12
256_T 26_D 0.83 0.12
131_K 89_I 0.82 0.11
406_S 105_V 0.82 0.11
287_M 87_V 0.82 0.11
65_T 33_I 0.82 0.11
381_S 98_V 0.82 0.11
611_E 58_V 0.82 0.11
611_E 87_V 0.82 0.11
616_K 20_L 0.82 0.11
335_R 102_V 0.81 0.11
613_N 41_G 0.81 0.11
511_I 108_V 0.81 0.11
54_A 20_L 0.81 0.11
489_V 37_Q 0.81 0.11
5_I 90_V 0.81 0.10
418_V 65_I 0.81 0.10
262_T 119_A 0.81 0.10
347_L 109_L 0.81 0.10
75_E 90_V 0.80 0.10
265_R 77_Q 0.80 0.10
282_V 103_D 0.80 0.10
614_Y 51_T 0.80 0.10
279_G 105_V 0.80 0.10
365_S 59_T 0.79 0.10
610_L 58_V 0.79 0.10
360_T 29_Y 0.79 0.10
270_K 67_P 0.79 0.10
466_T 96_R 0.79 0.09
89_N 29_Y 0.79 0.09
25_Q 24_L 0.79 0.09
518_R 132_T 0.79 0.09
104_A 140_R 0.78 0.09
285_Q 141_M 0.78 0.09
43_I 86_T 0.78 0.09
534_S 41_G 0.78 0.09
403_L 24_L 0.78 0.09
567_V 29_Y 0.78 0.09
630_S 44_Q 0.78 0.09
72_L 61_L 0.78 0.09
505_L 143_I 0.77 0.09
391_K 132_T 0.77 0.09
640_L 64_V 0.77 0.09
49_S 92_N 0.77 0.09
123_L 24_L 0.77 0.09
593_A 142_L 0.76 0.08
395_A 139_D 0.76 0.08
430_I 66_V 0.76 0.08
468_V 94_G 0.76 0.08
414_I 96_R 0.76 0.08
614_Y 69_V 0.76 0.08
119_I 151_L 0.76 0.08
534_S 87_V 0.76 0.08
561_I 100_I 0.76 0.08
271_V 40_R 0.76 0.08
88_I 33_I 0.76 0.08
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0355 seconds.