GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
ARGB - ARGD
UniProt: P0A6C8 - P18335
Length: 664
Sequences: 731
Seq/Len: 1.13
I_Prob: 0.00

ARGB - Acetylglutamate kinase
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: ARGB
ARGD - Acetylornithine/succinyldiaminopimelate aminotransferase
Paralog alert: 0.89 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ARGD ASTC BIOA GABT GSA PAT PUUE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
136_L 190_V 1.03 0.00
88_L 58_H 0.93 0.00
148_I 179_V 0.92 0.00
121_H 191_V 0.87 0.00
86_K 188_C 0.85 0.00
57_L 164_K 0.83 0.00
75_I 40_Q 0.83 0.00
5_L 150_S 0.80 0.00
110_V 302_I 0.80 0.00
140_G 186_H 0.76 0.00
40_I 399_A 0.75 0.00
60_K 73_T 0.75 0.00
196_M 305_P 0.75 0.00
232_V 376_M 0.75 0.00
125_A 86_A 0.74 0.00
38_L 134_I 0.74 0.00
169_A 41_G 0.73 0.00
186_L 21_Y 0.73 0.00
181_D 47_F 0.73 0.00
203_Q 237_D 0.71 0.00
177_I 388_D 0.71 0.00
211_T 393_M 0.70 0.00
148_I 305_P 0.70 0.00
154_G 228_V 0.70 0.00
159_V 148_T 0.69 0.00
166_T 214_E 0.69 0.00
159_V 225_F 0.69 0.00
100_V 363_E 0.68 0.00
188_G 388_D 0.68 0.00
200_K 65_N 0.67 0.00
27_L 32_Q 0.67 0.00
197_T 55_A 0.67 0.00
125_A 305_P 0.66 0.00
134_N 263_I 0.66 0.00
75_I 59_C 0.66 0.00
147_S 100_E 0.66 0.00
95_H 297_A 0.66 0.00
46_C 148_T 0.66 0.00
215_I 154_Q 0.66 0.00
232_V 147_F 0.65 0.00
157_M 148_T 0.65 0.00
27_L 21_Y 0.65 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0232 seconds.