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DDLA - GREB
UniProt: P0A6J8 - P30128
Length: 522
Sequences: 304
Seq/Len: 0.65
I_Prob: 0.07

DDLA - D-alanine--D-alanine ligase A
Paralog alert: 0.89 [within 20: 0.61] - ratio of genomes with paralogs
Cluster includes: ACCC DDLA DDLB GSHB PUR2 PURK PURT RIMK
GREB - Transcription elongation factor GreB
Paralog alert: 0.45 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: GREA GREB RNK
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
282_I 151_N 1.79 0.07
296_A 57_E 1.34 0.02
41_L 13_K 1.20 0.01
145_K 49_Q 1.18 0.01
155_I 54_R 1.18 0.01
119_M 124_M 1.16 0.01
289_A 126_R 1.14 0.01
156_A 49_Q 1.10 0.01
156_A 77_Y 1.07 0.01
178_L 9_E 1.05 0.01
33_K 12_E 1.04 0.01
39_V 85_V 1.02 0.01
313_I 100_T 1.02 0.01
102_I 13_K 1.02 0.01
127_F 117_Y 1.01 0.01
56_N 11_Y 1.01 0.01
286_A 96_D 1.01 0.01
102_I 113_G 1.01 0.01
86_Q 16_Q 1.00 0.01
95_P 138_V 0.99 0.01
213_E 152_A 0.98 0.01
9_V 25_E 0.98 0.01
248_V 86_F 0.98 0.01
242_S 153_I 0.98 0.01
86_Q 20_Y 0.96 0.01
156_A 43_S 0.96 0.01
36_F 74_I 0.96 0.01
221_E 95_N 0.95 0.01
242_S 115_K 0.95 0.01
221_E 146_A 0.94 0.01
133_L 115_K 0.94 0.01
157_P 114_R 0.92 0.01
82_K 43_S 0.92 0.01
311_V 74_I 0.92 0.01
306_T 12_E 0.91 0.01
190_G 13_K 0.91 0.01
165_N 133_V 0.91 0.01
127_F 151_N 0.90 0.01
39_V 150_V 0.90 0.01
190_G 29_V 0.90 0.01
75_S 81_Q 0.89 0.01
313_I 43_S 0.89 0.00
75_S 49_Q 0.89 0.00
131_D 74_I 0.89 0.00
313_I 74_I 0.89 0.00
221_E 151_N 0.89 0.00
239_P 153_I 0.87 0.00
161_L 38_S 0.87 0.00
311_V 119_S 0.87 0.00
82_K 116_D 0.87 0.00
180_L 82_E 0.86 0.00
25_K 29_V 0.86 0.00
146_R 92_E 0.86 0.00
140_D 30_T 0.86 0.00
132_V 15_K 0.85 0.00
156_A 100_T 0.85 0.00
312_V 25_E 0.84 0.00
244_C 100_T 0.84 0.00
197_K 112_F 0.84 0.00
175_E 145_E 0.84 0.00
273_A 86_F 0.83 0.00
209_D 141_T 0.83 0.00
149_R 95_N 0.83 0.00
150_D 115_K 0.83 0.00
9_V 35_W 0.83 0.00
122_V 80_Q 0.83 0.00
173_E 78_S 0.83 0.00
216_H 145_E 0.83 0.00
9_V 146_A 0.83 0.00
216_H 151_N 0.82 0.00
155_I 28_E 0.82 0.00
145_K 38_S 0.82 0.00
56_N 155_Y 0.82 0.00
229_I 38_S 0.82 0.00
75_S 43_S 0.81 0.00
178_L 79_P 0.81 0.00
205_A 117_Y 0.81 0.00
155_I 58_I 0.81 0.00
183_F 152_A 0.81 0.00
209_D 8_R 0.80 0.00
175_E 86_F 0.80 0.00
212_F 21_L 0.80 0.00
216_H 25_E 0.80 0.00
208_V 137_A 0.79 0.00
95_P 57_E 0.79 0.00
145_K 77_Y 0.79 0.00
225_K 150_V 0.79 0.00
183_F 121_D 0.79 0.00
308_E 152_A 0.79 0.00
32_D 146_A 0.79 0.00
123_A 62_V 0.78 0.00
178_L 30_T 0.78 0.00
158_F 43_S 0.77 0.00
176_S 67_K 0.77 0.00
225_K 134_G 0.77 0.00
174_V 97_D 0.77 0.00
176_S 92_E 0.77 0.00
127_F 2_K 0.77 0.00
183_F 39_L 0.77 0.00
164_A 74_I 0.77 0.00
242_S 58_I 0.76 0.00
177_K 128_L 0.76 0.00
131_D 152_A 0.76 0.00
284_A 151_N 0.76 0.00
39_V 57_E 0.76 0.00
284_A 67_K 0.76 0.00
153_L 126_R 0.76 0.00
304_F 11_Y 0.75 0.00
296_A 152_A 0.75 0.00
102_I 154_E 0.75 0.00
72_S 89_A 0.75 0.00
213_E 84_K 0.75 0.00
102_I 134_G 0.75 0.00
127_F 146_A 0.75 0.00
127_F 34_T 0.75 0.00
96_L 93_I 0.75 0.00
9_V 20_Y 0.75 0.00
41_L 105_I 0.75 0.00
242_S 117_Y 0.74 0.00
175_E 6_V 0.74 0.00
178_L 63_R 0.74 0.00
83_H 43_S 0.74 0.00
176_S 34_T 0.74 0.00
217_K 3_T 0.74 0.00
124_N 156_V 0.74 0.00
102_I 12_E 0.74 0.00
218_V 147_S 0.74 0.00
134_A 29_V 0.74 0.00
164_A 132_E 0.73 0.00
190_G 137_A 0.73 0.00
159_I 15_K 0.73 0.00
124_N 9_E 0.73 0.00
9_V 63_R 0.73 0.00
201_E 70_E 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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