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GREA - YHBY
UniProt: P0A6W5 - P0AGK4
Length: 255
Sequences: 210
Seq/Len: 0.82
I_Prob: 0.32

GREA - Transcription elongation factor GreA
Paralog alert: 0.45 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: GREA GREB RNK
YHBY - RNA-binding protein YhbY
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YHBY
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
96_N 32_G 1.85 0.32
65_I 35_A 1.27 0.07
54_Q 53_T 1.27 0.07
133_K 31_E 1.22 0.06
104_T 40_A 1.21 0.05
143_T 72_A 1.17 0.05
86_V 9_Q 1.16 0.04
74_V 10_H 1.14 0.04
20_F 81_T 1.13 0.04
155_V 27_N 1.12 0.04
16_E 49_V 1.12 0.04
126_I 78_I 1.10 0.04
97_L 60_T 1.08 0.03
67_A 38_E 1.08 0.03
53_E 57_E 1.06 0.03
157_Y 11_L 1.04 0.03
74_V 80_K 1.04 0.03
104_T 90_E 1.00 0.02
116_K 86_R 0.99 0.02
122_V 49_V 0.98 0.02
4_I 83_V 0.98 0.02
114_D 24_L 0.97 0.02
31_A 42_E 0.96 0.02
39_H 45_E 0.96 0.02
97_L 84_L 0.96 0.02
30_I 23_L 0.95 0.02
123_N 85_Y 0.94 0.02
136_D 24_L 0.93 0.02
158_L 52_A 0.93 0.02
43_K 43_H 0.93 0.02
60_G 18_L 0.93 0.02
86_V 40_A 0.92 0.02
9_R 25_G 0.92 0.02
126_I 76_Q 0.92 0.02
87_I 59_K 0.92 0.02
88_F 36_E 0.91 0.02
28_E 82_L 0.91 0.02
121_S 11_L 0.89 0.02
61_R 24_L 0.89 0.02
34_A 12_K 0.89 0.01
121_S 75_V 0.89 0.01
67_A 49_V 0.88 0.01
74_V 32_G 0.88 0.01
11_A 73_C 0.88 0.01
74_V 15_A 0.87 0.01
70_S 1_M 0.87 0.01
141_I 63_V 0.87 0.01
103_Q 86_R 0.87 0.01
121_S 34_L 0.86 0.01
110_D 54_E 0.86 0.01
3_A 88_T 0.86 0.01
114_D 7_Q 0.85 0.01
86_V 84_L 0.85 0.01
10_G 28_G 0.85 0.01
85_R 37_I 0.84 0.01
98_D 5_T 0.84 0.01
20_F 80_K 0.83 0.01
114_D 75_V 0.83 0.01
68_K 22_V 0.83 0.01
119_L 84_L 0.83 0.01
56_G 72_A 0.83 0.01
11_A 86_R 0.82 0.01
122_V 57_E 0.82 0.01
4_I 13_G 0.82 0.01
46_A 44_H 0.82 0.01
28_E 42_E 0.82 0.01
29_I 12_K 0.82 0.01
158_L 5_T 0.81 0.01
131_I 24_L 0.81 0.01
72_A 4_S 0.81 0.01
148_V 24_L 0.81 0.01
32_A 86_R 0.81 0.01
110_D 85_Y 0.80 0.01
118_N 89_K 0.80 0.01
63_K 7_Q 0.80 0.01
140_V 51_I 0.80 0.01
67_A 94_S 0.80 0.01
119_L 67_V 0.79 0.01
119_L 69_E 0.79 0.01
73_Q 76_Q 0.79 0.01
35_E 19_K 0.79 0.01
13_K 49_V 0.79 0.01
54_Q 81_T 0.79 0.01
94_V 77_V 0.79 0.01
43_K 63_V 0.79 0.01
94_V 76_Q 0.79 0.01
158_L 55_D 0.79 0.01
13_K 60_T 0.78 0.01
143_T 8_K 0.78 0.01
153_I 75_V 0.78 0.01
38_E 71_G 0.78 0.01
3_A 45_E 0.78 0.01
122_V 61_L 0.78 0.01
143_T 12_K 0.78 0.01
71_N 85_Y 0.78 0.01
78_T 30_T 0.78 0.01
101_E 23_L 0.78 0.01
152_V 64_E 0.77 0.01
15_R 78_I 0.77 0.01
30_I 21_V 0.77 0.01
11_A 56_R 0.77 0.01
143_T 3_L 0.77 0.01
133_K 28_G 0.77 0.01
13_K 39_Q 0.77 0.01
153_I 23_L 0.77 0.01
80_M 91_R 0.76 0.01
128_R 36_E 0.76 0.01
115_F 89_K 0.76 0.01
128_R 56_R 0.76 0.01
145_G 83_V 0.76 0.01
129_G 59_K 0.76 0.01
90_A 21_V 0.76 0.01
100_D 13_G 0.75 0.01
75_I 28_G 0.75 0.01
76_D 82_L 0.75 0.01
104_T 17_P 0.75 0.01
122_V 31_E 0.75 0.01
157_Y 25_G 0.75 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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