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PYRH - TAMA
UniProt: P0A7E9 - P0ADE4
Length: 818
Sequences: 516
Seq/Len: 0.69
I_Prob: 0.74

PYRH - Uridylate kinase
Paralog alert: 0.90 [within 20: 0.10] - ratio of genomes with paralogs
Cluster includes: PYRH
TAMA - Translocation and assembly module TamA
Paralog alert: 0.76 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: TAMA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
188_T 426_F 2.16 0.74
41_I 195_T 1.64 0.35
47_L 237_N 1.24 0.11
27_F 174_L 1.19 0.09
186_Q 121_K 1.15 0.08
187_L 267_T 1.15 0.08
182_T 111_V 1.11 0.07
191_E 314_S 1.09 0.06
10_K 301_S 1.08 0.06
179_P 109_T 1.07 0.06
60_L 206_L 1.06 0.06
188_T 147_K 1.05 0.05
53_V 264_T 1.05 0.05
161_V 88_K 1.03 0.05
131_V 285_T 1.01 0.04
66_L 196_F 1.01 0.04
10_K 541_G 1.00 0.04
208_A 211_P 0.99 0.04
111_N 189_Y 0.96 0.04
186_Q 256_L 0.95 0.03
229_V 346_S 0.95 0.03
86_M 404_T 0.95 0.03
60_L 196_F 0.94 0.03
114_C 530_R 0.93 0.03
51_V 245_F 0.93 0.03
190_S 286_W 0.93 0.03
213_L 446_V 0.93 0.03
22_Q 385_L 0.92 0.03
8_V 98_V 0.91 0.03
236_G 463_P 0.91 0.03
53_V 256_L 0.91 0.03
131_V 317_M 0.91 0.03
156_I 502_G 0.90 0.03
99_Y 218_Y 0.90 0.03
172_T 286_W 0.90 0.03
164_A 476_I 0.90 0.03
162_L 158_Y 0.89 0.03
76_G 503_S 0.89 0.03
67_A 159_F 0.89 0.03
132_V 571_I 0.88 0.03
215_I 265_E 0.88 0.03
102_A 134_G 0.88 0.02
206_T 358_S 0.87 0.02
153_G 572_G 0.87 0.02
153_G 140_G 0.87 0.02
160_V 433_N 0.87 0.02
220_M 241_V 0.87 0.02
46_E 527_S 0.87 0.02
75_V 229_R 0.87 0.02
85_V 267_T 0.87 0.02
213_L 178_F 0.86 0.02
153_G 522_S 0.86 0.02
183_M 188_R 0.86 0.02
78_H 219_E 0.85 0.02
182_T 235_W 0.85 0.02
66_L 268_I 0.85 0.02
86_M 74_Y 0.85 0.02
223_P 264_T 0.85 0.02
239_I 211_P 0.85 0.02
131_V 216_D 0.85 0.02
53_V 109_T 0.85 0.02
50_Q 566_G 0.85 0.02
219_N 445_F 0.84 0.02
24_T 300_T 0.84 0.02
67_A 517_A 0.84 0.02
205_F 337_T 0.84 0.02
229_V 428_V 0.84 0.02
172_T 127_L 0.84 0.02
188_T 240_V 0.84 0.02
9_Y 127_L 0.84 0.02
176_A 504_L 0.84 0.02
100_V 94_L 0.84 0.02
34_L 315_Y 0.83 0.02
108_I 479_Y 0.83 0.02
213_L 501_T 0.83 0.02
124_S 223_L 0.83 0.02
128_N 225_E 0.83 0.02
240_T 432_Q 0.83 0.02
216_R 167_Q 0.83 0.02
153_G 96_A 0.83 0.02
239_I 398_R 0.83 0.02
50_Q 494_K 0.83 0.02
29_I 476_I 0.82 0.02
113_V 90_G 0.82 0.02
217_V 567_L 0.82 0.02
12_I 518_V 0.82 0.02
53_V 441_D 0.82 0.02
234_K 216_D 0.82 0.02
153_G 389_G 0.82 0.02
9_Y 149_L 0.81 0.02
41_I 542_V 0.81 0.02
212_K 377_G 0.81 0.02
147_S 446_V 0.81 0.02
110_L 271_G 0.81 0.02
187_L 503_S 0.81 0.02
180_T 426_F 0.81 0.02
230_V 280_P 0.81 0.02
99_Y 546_S 0.81 0.02
27_F 382_T 0.81 0.02
178_D 271_G 0.81 0.02
41_I 412_S 0.81 0.02
66_L 315_Y 0.81 0.02
229_V 138_N 0.81 0.02
78_H 230_L 0.81 0.02
191_E 184_N 0.80 0.02
195_K 391_M 0.80 0.02
53_V 468_F 0.80 0.02
230_V 90_G 0.80 0.02
198_K 138_N 0.80 0.02
110_L 516_G 0.80 0.02
131_V 468_F 0.80 0.02
51_V 540_V 0.80 0.02
230_V 122_D 0.80 0.02
128_N 265_E 0.79 0.02
156_I 313_F 0.79 0.02
10_K 329_L 0.79 0.02
116_S 320_L 0.79 0.02
212_K 431_A 0.79 0.02
215_I 483_S 0.79 0.02
24_T 133_I 0.79 0.02
150_C 553_L 0.79 0.02
31_A 291_M 0.79 0.02
103_R 403_P 0.79 0.02
76_G 238_S 0.79 0.02
172_T 75_Y 0.79 0.02
52_G 408_S 0.79 0.02
188_T 536_T 0.79 0.02
131_V 143_E 0.79 0.02
26_G 215_G 0.78 0.02
185_E 449_G 0.78 0.01
235_E 255_P 0.78 0.01
10_K 514_W 0.78 0.01
121_E 507_Q 0.78 0.01
133_I 382_T 0.78 0.01
198_K 484_I 0.77 0.01
194_E 121_K 0.77 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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