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PRMA - RSME
UniProt: P0A8T1 - P0AGL7
Length: 536
Sequences: 380
Seq/Len: 0.71
I_Prob: 0.00

PRMA - Ribosomal protein L11 methyltransferase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: PRMA
RSME - Ribosomal RNA small subunit methyltransferase E
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RSME
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
100_M 134_I 1.45 0.00
143_P 140_E 1.33 0.00
147_L 238_R 1.27 0.00
210_L 8_H 1.21 0.00
232_L 140_E 1.20 0.00
115_C 228_A 1.19 0.00
19_S 40_L 1.16 0.00
113_W 6_I 1.16 0.00
232_L 76_S 1.12 0.00
24_E 89_G 1.11 0.00
191_P 169_L 1.10 0.00
119_R 173_P 1.09 0.00
288_I 146_R 1.08 0.00
22_L 126_K 1.07 0.00
149_L 42_L 1.07 0.00
274_F 134_I 1.05 0.00
116_P 198_G 1.05 0.00
215_P 143_G 1.04 0.00
56_V 68_E 1.04 0.00
104_H 199_L 1.04 0.00
38_T 142_C 1.03 0.00
18_L 122_E 1.02 0.00
250_G 160_C 1.02 0.00
248_V 158_A 1.01 0.00
115_C 84_Q 1.00 0.00
186_G 216_L 1.00 0.00
269_A 117_V 1.00 0.00
287_R 25_A 0.99 0.00
171_I 119_L 0.99 0.00
226_V 178_S 0.98 0.00
6_L 231_A 0.98 0.00
219_P 202_D 0.97 0.00
103_F 119_L 0.97 0.00
148_C 131_W 0.96 0.00
193_A 97_Q 0.96 0.00
136_A 114_R 0.95 0.00
115_C 241_D 0.95 0.00
175_A 100_I 0.95 0.00
144_T 139_C 0.95 0.00
237_R 112_S 0.95 0.00
158_T 216_L 0.94 0.00
14_N 7_Y 0.94 0.00
252_L 35_G 0.94 0.00
56_V 67_L 0.94 0.00
34_D 102_L 0.94 0.00
163_I 243_G 0.94 0.00
183_K 158_A 0.93 0.00
232_L 232_I 0.93 0.00
22_L 104_V 0.93 0.00
148_C 119_L 0.93 0.00
121_V 237_V 0.93 0.00
241_P 32_L 0.92 0.00
254_G 28_I 0.92 0.00
3_W 97_Q 0.92 0.00
112_L 84_Q 0.92 0.00
240_A 23_D 0.92 0.00
237_R 83_G 0.92 0.00
262_Q 142_C 0.91 0.00
143_P 127_K 0.91 0.00
59_L 232_I 0.91 0.00
149_L 28_I 0.91 0.00
16_E 82_L 0.91 0.00
29_S 139_C 0.91 0.00
250_G 37_G 0.91 0.00
111_R 40_L 0.91 0.00
105_P 89_G 0.91 0.00
3_W 40_L 0.90 0.00
56_V 23_D 0.90 0.00
119_R 27_H 0.90 0.00
78_L 159_W 0.90 0.00
282_K 240_G 0.90 0.00
29_S 86_M 0.90 0.00
70_V 199_L 0.90 0.00
1_M 224_T 0.90 0.00
26_G 38_Q 0.90 0.00
16_E 34_M 0.90 0.00
102_N 3_I 0.90 0.00
207_S 39_A 0.89 0.00
175_A 99_S 0.89 0.00
218_Q 112_S 0.89 0.00
255_L 107_I 0.89 0.00
136_A 115_C 0.89 0.00
59_L 221_V 0.89 0.00
227_V 64_V 0.88 0.00
158_T 29_G 0.88 0.00
273_S 187_E 0.87 0.00
113_W 234_A 0.87 0.00
181_A 224_T 0.87 0.00
113_W 140_E 0.87 0.00
197_S 173_P 0.87 0.00
128_N 8_H 0.87 0.00
234_G 113_E 0.87 0.00
175_A 42_L 0.86 0.00
100_M 172_H 0.86 0.00
34_D 85_V 0.86 0.00
173_A 76_S 0.86 0.00
182_A 184_L 0.86 0.00
192_Q 137_A 0.86 0.00
119_R 172_H 0.86 0.00
59_L 173_P 0.86 0.00
16_E 122_E 0.85 0.00
159_G 38_Q 0.85 0.00
227_V 26_N 0.85 0.00
151_W 207_T 0.85 0.00
108_F 136_I 0.85 0.00
116_P 144_R 0.85 0.00
108_F 213_T 0.85 0.00
195_Q 55_T 0.85 0.00
275_A 135_A 0.84 0.00
37_D 127_K 0.84 0.00
287_R 134_I 0.84 0.00
116_P 173_P 0.84 0.00
287_R 93_E 0.84 0.00
57_I 137_A 0.84 0.00
99_W 173_P 0.84 0.00
69_V 68_E 0.83 0.00
186_G 25_A 0.83 0.00
218_Q 90_E 0.83 0.00
245_V 147_V 0.83 0.00
279_V 96_I 0.83 0.00
291_R 67_L 0.83 0.00
243_I 85_V 0.83 0.00
109_G 6_I 0.83 0.00
21_A 100_I 0.83 0.00
179_L 5_R 0.83 0.00
113_W 32_L 0.83 0.00
171_I 8_H 0.83 0.00
129_V 61_S 0.82 0.00
198_R 58_S 0.82 0.00
2_P 105_S 0.82 0.00
232_L 240_G 0.82 0.00
89_Q 149_E 0.82 0.00
167_C 190_R 0.82 0.00
147_L 175_A 0.82 0.00
52_G 171_L 0.82 0.00
144_T 118_K 0.82 0.00
234_G 142_C 0.82 0.00
167_C 159_W 0.82 0.00
72_I 93_E 0.81 0.00
34_D 118_K 0.81 0.00
264_E 157_E 0.81 0.00
136_A 192_L 0.81 0.00
68_D 161_A 0.81 0.00
241_P 96_I 0.81 0.00
5_Q 89_G 0.81 0.00
194_I 5_R 0.81 0.00
175_A 15_H 0.81 0.00
111_R 201_A 0.81 0.00
119_R 130_Q 0.80 0.00
292_K 30_R 0.80 0.00
124_E 65_K 0.80 0.00
175_A 90_E 0.80 0.00
167_C 230_T 0.80 0.00
210_L 172_H 0.80 0.00
17_D 219_P 0.80 0.00
210_L 80_I 0.80 0.00
193_A 98_K 0.80 0.00
167_C 219_P 0.80 0.00
104_H 193_I 0.80 0.00
130_M 62_V 0.80 0.00
276_L 201_A 0.79 0.00
232_L 123_R 0.79 0.00
156_D 89_G 0.79 0.00
143_P 83_G 0.79 0.00
193_A 114_R 0.79 0.00
284_E 94_F 0.79 0.00
228_V 8_H 0.79 0.00
235_P 166_G 0.79 0.00
232_L 119_L 0.79 0.00
60_F 90_E 0.79 0.00
162_V 18_I 0.79 0.00
3_W 102_L 0.78 0.00
194_I 47_N 0.78 0.00
227_V 205_A 0.78 0.00
225_D 147_V 0.78 0.00
18_L 3_I 0.78 0.00
74_E 185_P 0.78 0.00
176_A 23_D 0.78 0.00
247_P 65_K 0.78 0.00
165_F 86_M 0.78 0.00
132_D 198_G 0.78 0.00
18_L 28_I 0.78 0.00
98_E 26_N 0.78 0.00
108_F 139_C 0.78 0.00
249_S 209_R 0.78 0.00
182_A 129_Q 0.78 0.00
195_Q 96_I 0.78 0.00
153_D 240_G 0.78 0.00
85_H 7_Y 0.77 0.00
129_V 190_R 0.77 0.00
162_V 157_E 0.77 0.00
52_G 99_S 0.77 0.00
96_E 133_K 0.77 0.00
194_I 139_C 0.77 0.00
186_G 209_R 0.77 0.00
233_A 75_E 0.77 0.00
103_F 127_K 0.77 0.00
125_N 235_L 0.77 0.00
247_P 118_K 0.77 0.00
165_F 234_A 0.77 0.00
259_L 172_H 0.76 0.00
173_A 77_P 0.76 0.00
232_L 4_P 0.76 0.00
29_S 97_Q 0.76 0.00
220_E 206_M 0.76 0.00
57_I 62_V 0.76 0.00
182_A 9_P 0.76 0.00
171_I 174_R 0.76 0.00
65_D 110_L 0.76 0.00
22_L 102_L 0.76 0.00
59_L 88_R 0.76 0.00
112_L 216_L 0.76 0.00
132_D 98_K 0.76 0.00
113_W 4_P 0.76 0.00
149_L 106_L 0.76 0.00
185_I 93_E 0.75 0.00
177_L 137_A 0.75 0.00
143_P 82_L 0.75 0.00
110_E 122_E 0.75 0.00
227_V 61_S 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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