GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
FLIE - FLIO
UniProt: P0A8T5 - P22586
Length: 225
Sequences: 143
Seq/Len: 0.66
I_Prob: 0.08

FLIE - Flagellar hook-basal body complex protein FliE
Paralog alert: 0.12 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIE
FLIO - Flagellar protein FliO
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIO
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_A 83_T 1.80 0.08
59_F 67_R 1.73 0.07
98_E 71_V 1.40 0.03
97_Q 20_Q 1.39 0.03
101_S 62_L 1.35 0.02
42_L 46_P 1.32 0.02
71_V 107_F 1.30 0.02
75_M 39_V 1.30 0.02
52_A 74_E 1.27 0.02
99_V 111_M 1.26 0.02
76_Q 59_S 1.23 0.02
81_S 28_I 1.22 0.02
86_I 23_G 1.20 0.01
82_M 57_S 1.20 0.01
80_V 36_A 1.17 0.01
35_A 117_R 1.16 0.01
4_I 87_I 1.16 0.01
52_A 72_D 1.15 0.01
83_Q 20_Q 1.15 0.01
103_Q 61_S 1.12 0.01
80_V 32_I 1.12 0.01
66_V 109_S 1.12 0.01
98_E 61_S 1.11 0.01
10_V 80_L 1.11 0.01
41_A 83_T 1.11 0.01
52_A 84_A 1.07 0.01
14_L 67_R 1.07 0.01
100_M 20_Q 1.06 0.01
2_S 62_L 1.06 0.01
33_S 111_M 1.06 0.01
19_M 87_I 1.05 0.01
84_M 77_R 1.05 0.01
57_E 55_K 1.04 0.01
99_V 24_A 1.04 0.01
26_S 11_A 1.03 0.01
28_P 104_Q 1.02 0.01
74_D 79_V 1.01 0.01
52_A 117_R 1.01 0.01
103_Q 83_T 1.01 0.01
32_I 87_I 1.00 0.01
73_T 108_Q 1.00 0.01
55_Q 65_R 1.00 0.01
54_T 45_A 1.00 0.01
19_M 62_L 0.99 0.01
91_K 88_N 0.99 0.01
36_G 71_V 0.99 0.01
71_V 37_W 0.98 0.01
99_V 84_A 0.97 0.01
75_M 79_V 0.97 0.01
33_S 27_A 0.97 0.01
65_G 109_S 0.97 0.01
72_M 37_W 0.96 0.01
76_Q 78_L 0.96 0.01
72_M 67_R 0.96 0.01
82_M 28_I 0.96 0.01
55_Q 52_N 0.96 0.01
6_G 69_V 0.95 0.01
32_I 62_L 0.95 0.01
78_A 50_G 0.95 0.01
100_M 66_E 0.94 0.01
74_D 95_P 0.94 0.01
55_Q 96_S 0.94 0.01
84_M 79_V 0.94 0.01
104_V 29_I 0.93 0.01
23_A 29_I 0.93 0.01
14_L 108_Q 0.93 0.01
52_A 76_A 0.93 0.01
79_S 29_I 0.93 0.01
86_I 72_D 0.92 0.01
33_S 24_A 0.92 0.01
91_K 35_A 0.92 0.01
25_E 14_S 0.92 0.01
42_L 62_L 0.91 0.01
44_R 40_K 0.91 0.01
45_I 77_R 0.91 0.01
78_A 58_A 0.90 0.01
70_D 69_V 0.90 0.01
16_A 95_P 0.90 0.01
32_I 40_K 0.90 0.01
36_G 113_N 0.90 0.01
8_E 70_V 0.89 0.01
39_H 29_I 0.89 0.01
33_S 103_P 0.89 0.01
46_S 48_R 0.89 0.01
6_G 74_E 0.89 0.01
47_D 73_V 0.89 0.01
46_S 34_A 0.88 0.01
70_D 68_V 0.88 0.01
67_A 17_P 0.88 0.01
83_Q 90_L 0.88 0.01
97_Q 86_Q 0.87 0.01
6_G 93_L 0.87 0.01
86_I 28_I 0.87 0.01
40_A 79_V 0.87 0.01
69_N 91_H 0.87 0.01
18_A 90_L 0.87 0.01
45_I 22_S 0.87 0.01
45_I 28_I 0.86 0.01
51_A 54_L 0.86 0.01
78_A 16_A 0.86 0.01
66_V 80_L 0.86 0.01
80_V 17_P 0.86 0.00
33_S 64_A 0.86 0.00
91_K 89_L 0.85 0.00
101_S 66_E 0.85 0.00
74_D 77_R 0.85 0.00
91_K 116_K 0.85 0.00
84_M 35_A 0.85 0.00
56_A 41_R 0.85 0.00
68_L 93_L 0.84 0.00
79_S 40_K 0.84 0.00
46_S 24_A 0.84 0.00
23_A 56_I 0.84 0.00
52_A 90_L 0.84 0.00
41_A 114_L 0.83 0.00
29_Q 29_I 0.83 0.00
38_L 35_A 0.83 0.00
8_E 39_V 0.82 0.00
79_S 21_V 0.82 0.00
73_T 26_I 0.82 0.00
100_M 67_R 0.82 0.00
100_M 31_L 0.82 0.00
76_Q 90_L 0.81 0.00
78_A 30_A 0.81 0.00
5_Q 79_V 0.81 0.00
64_P 91_H 0.81 0.00
37_Q 88_N 0.81 0.00
70_D 21_V 0.81 0.00
54_T 34_A 0.81 0.00
45_I 79_V 0.81 0.00
59_F 69_V 0.80 0.00
49_Q 55_K 0.80 0.00
37_Q 74_E 0.80 0.00
2_S 30_A 0.80 0.00
82_M 27_A 0.80 0.00
8_E 46_P 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0206 seconds.