GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
FLIE - FLIJ
UniProt: P0A8T5 - P52613
Length: 251
Sequences: 251
Seq/Len: 1.01
I_Prob: 0.57

FLIE - Flagellar hook-basal body complex protein FliE
Paralog alert: 0.12 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIE
FLIJ - Flagellar FliJ protein
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLIJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
8_E 10_L 1.88 0.57
75_M 128_R 1.62 0.37
71_V 60_G 1.56 0.32
104_V 7_L 1.54 0.31
79_S 101_W 1.50 0.28
10_V 46_Q 1.50 0.28
87_Q 101_W 1.46 0.25
76_Q 69_Y 1.41 0.22
103_Q 130_D 1.37 0.20
84_M 18_V 1.36 0.19
52_A 14_A 1.36 0.19
41_A 37_E 1.34 0.18
81_S 80_I 1.31 0.16
97_Q 117_R 1.30 0.16
66_V 103_E 1.30 0.16
69_N 75_T 1.25 0.14
41_A 61_I 1.23 0.13
48_T 22_A 1.21 0.12
45_I 75_T 1.20 0.12
52_A 124_L 1.19 0.11
71_V 76_L 1.19 0.11
44_R 117_R 1.18 0.10
42_L 128_R 1.16 0.10
9_G 105_K 1.15 0.10
91_K 27_E 1.14 0.09
40_A 37_E 1.11 0.08
69_N 108_L 1.11 0.08
42_L 138_A 1.11 0.08
58_K 64_N 1.10 0.08
43_D 20_D 1.10 0.08
37_Q 18_V 1.10 0.08
68_L 79_A 1.09 0.08
72_M 76_L 1.09 0.08
14_L 130_D 1.09 0.07
78_A 46_Q 1.08 0.07
91_K 132_K 1.07 0.07
95_A 55_S 1.07 0.07
40_A 94_V 1.06 0.07
46_S 26_G 1.06 0.07
49_Q 75_T 1.05 0.07
76_Q 10_L 1.05 0.07
42_L 30_R 1.05 0.07
65_G 107_R 1.04 0.06
42_L 81_T 1.03 0.06
8_E 7_L 1.02 0.06
74_D 75_T 1.02 0.06
79_S 140_R 1.02 0.06
45_I 109_Q 1.01 0.06
22_R 119_S 1.00 0.05
66_V 24_L 1.00 0.05
16_A 110_A 1.00 0.05
3_A 83_H 0.99 0.05
92_L 79_A 0.98 0.05
79_S 126_E 0.98 0.05
104_V 30_R 0.97 0.05
56_A 14_A 0.97 0.05
76_Q 80_I 0.97 0.05
67_A 94_V 0.97 0.05
61_L 138_A 0.97 0.05
69_N 66_W 0.97 0.05
84_M 32_C 0.96 0.05
55_Q 88_N 0.96 0.05
57_E 86_Q 0.96 0.05
11_I 96_I 0.96 0.05
45_I 48_E 0.96 0.05
46_S 73_I 0.96 0.04
70_D 14_A 0.95 0.04
70_D 102_R 0.95 0.04
79_S 100_S 0.94 0.04
69_N 109_Q 0.94 0.04
99_V 28_M 0.94 0.04
14_L 115_Q 0.93 0.04
92_L 21_A 0.93 0.04
37_Q 90_W 0.92 0.04
48_T 139_Q 0.92 0.04
86_I 110_A 0.92 0.04
37_Q 2_A 0.91 0.04
104_V 6_A 0.91 0.04
60_T 82_Q 0.91 0.04
77_K 101_W 0.91 0.04
58_K 112_Q 0.91 0.04
27_L 123_L 0.90 0.04
39_H 137_F 0.90 0.04
74_D 32_C 0.90 0.04
60_T 18_V 0.89 0.03
91_K 70_Q 0.89 0.03
91_K 38_Q 0.89 0.03
73_T 24_L 0.89 0.03
78_A 29_R 0.89 0.03
98_E 7_L 0.89 0.03
58_K 66_W 0.89 0.03
41_A 109_Q 0.89 0.03
79_S 60_G 0.88 0.03
11_I 25_L 0.88 0.03
99_V 74_Q 0.88 0.03
39_H 47_N 0.88 0.03
39_H 128_R 0.88 0.03
85_G 66_W 0.88 0.03
56_A 24_L 0.87 0.03
79_S 69_Y 0.87 0.03
52_A 43_I 0.87 0.03
70_D 21_A 0.87 0.03
42_L 98_L 0.87 0.03
70_D 101_W 0.87 0.03
19_M 8_A 0.86 0.03
36_G 15_E 0.86 0.03
81_S 70_Q 0.86 0.03
57_E 47_N 0.86 0.03
71_V 73_I 0.86 0.03
13_Q 10_L 0.86 0.03
98_E 122_A 0.86 0.03
48_T 97_A 0.85 0.03
64_P 48_E 0.85 0.03
87_Q 26_G 0.85 0.03
69_N 10_L 0.85 0.03
81_S 118_Q 0.85 0.03
73_T 52_N 0.85 0.03
16_A 76_L 0.84 0.03
41_A 89_Q 0.84 0.03
21_A 60_G 0.84 0.03
24_Q 121_A 0.84 0.03
25_E 36_E 0.84 0.03
51_A 73_I 0.84 0.03
87_Q 60_G 0.84 0.03
35_A 70_Q 0.84 0.03
86_I 37_E 0.83 0.03
92_L 38_Q 0.83 0.03
46_S 84_R 0.83 0.03
35_A 87_L 0.83 0.03
42_L 129_L 0.83 0.03
82_M 22_A 0.83 0.03
52_A 79_A 0.83 0.03
45_I 57_M 0.82 0.03
25_E 124_L 0.82 0.03
103_Q 83_H 0.82 0.03
56_A 71_Q 0.82 0.03
82_M 145_K 0.82 0.03
16_A 103_E 0.82 0.02
92_L 19_E 0.82 0.02
14_L 101_W 0.82 0.02
92_L 14_A 0.82 0.02
54_T 100_S 0.82 0.02
38_L 9_T 0.81 0.02
33_S 19_E 0.81 0.02
80_V 47_N 0.81 0.02
82_M 83_H 0.81 0.02
79_S 113_T 0.81 0.02
30_P 59_A 0.81 0.02
9_G 33_Q 0.81 0.02
59_F 111_W 0.81 0.02
71_V 117_R 0.81 0.02
15_Q 105_K 0.81 0.02
70_D 136_E 0.81 0.02
40_A 62_T 0.80 0.02
41_A 86_Q 0.80 0.02
72_M 60_G 0.80 0.02
14_L 66_W 0.80 0.02
58_K 74_Q 0.80 0.02
52_A 99_N 0.80 0.02
85_G 108_L 0.80 0.02
78_A 134_M 0.80 0.02
6_G 73_I 0.80 0.02
52_A 40_K 0.79 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0225 seconds.