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BAME - RATB
UniProt: P0A937 - P52119
Length: 209
Sequences: 179
Seq/Len: 0.87
I_Prob: 0.49

BAME - Outer membrane protein assembly factor BamE
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: BAME
RATB - UPF0125 protein RatB
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RATB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
45_K 79_I 1.91 0.49
55_V 8_E 1.57 0.25
57_Y 42_L 1.45 0.18
41_N 56_Y 1.31 0.12
111_S 44_T 1.25 0.10
58_A 10_A 1.25 0.10
37_Y 10_A 1.21 0.08
77_F 83_K 1.14 0.07
29_R 31_E 1.13 0.06
18_A 39_L 1.11 0.06
91_L 53_V 1.10 0.06
52_Q 94_A 1.10 0.06
32_I 84_E 1.09 0.06
101_L 60_A 1.09 0.05
71_N 60_A 1.07 0.05
25_R 57_S 1.06 0.05
48_V 92_K 1.06 0.05
46_I 7_V 1.06 0.05
58_A 13_L 1.05 0.05
11_A 10_A 1.05 0.05
72_T 57_S 1.04 0.04
95_F 87_R 1.04 0.04
98_S 35_R 1.03 0.04
41_N 29_T 1.03 0.04
40_A 22_V 1.02 0.04
101_L 8_E 1.01 0.04
32_I 13_L 1.01 0.04
55_V 55_I 1.01 0.04
48_V 56_Y 1.00 0.04
47_R 92_K 0.99 0.04
77_F 29_T 0.98 0.04
82_G 80_A 0.97 0.03
27_V 38_G 0.96 0.03
74_F 56_Y 0.96 0.03
101_L 13_L 0.96 0.03
46_I 28_A 0.95 0.03
32_I 19_L 0.94 0.03
16_L 84_E 0.92 0.03
102_T 30_V 0.91 0.03
64_M 50_K 0.91 0.03
105_D 94_A 0.91 0.03
48_V 29_T 0.90 0.03
102_T 7_V 0.90 0.03
17_T 43_R 0.90 0.02
31_D 48_L 0.89 0.02
23_L 41_E 0.89 0.02
72_T 68_D 0.88 0.02
46_I 43_R 0.88 0.02
98_S 68_D 0.87 0.02
39_T 33_A 0.87 0.02
62_P 89_R 0.87 0.02
33_N 84_E 0.87 0.02
71_N 25_Q 0.87 0.02
94_T 20_Q 0.87 0.02
94_T 55_I 0.87 0.02
108_P 21_R 0.87 0.02
92_T 84_E 0.86 0.02
32_I 79_I 0.86 0.02
46_I 10_A 0.86 0.02
16_L 91_E 0.86 0.02
50_M 75_Y 0.85 0.02
97_S 45_D 0.85 0.02
71_N 48_L 0.85 0.02
98_S 44_T 0.85 0.02
87_T 7_V 0.85 0.02
108_P 7_V 0.85 0.02
15_M 87_R 0.84 0.02
59_L 59_P 0.84 0.02
68_F 81_D 0.83 0.02
85_G 14_P 0.83 0.02
37_Y 80_A 0.83 0.02
47_R 18_Y 0.83 0.02
82_G 85_L 0.83 0.02
71_N 65_S 0.83 0.02
32_I 49_T 0.83 0.02
64_M 48_L 0.83 0.02
65_S 49_T 0.82 0.02
6_L 77_P 0.82 0.02
65_S 29_T 0.82 0.02
9_A 65_S 0.82 0.02
29_R 53_V 0.82 0.02
43_V 84_E 0.82 0.02
10_A 45_D 0.82 0.02
107_K 45_D 0.82 0.02
80_Q 44_T 0.82 0.02
51_T 91_E 0.81 0.02
82_G 83_K 0.81 0.02
90_T 58_R 0.81 0.02
57_Y 74_I 0.81 0.02
72_T 58_R 0.80 0.02
55_V 30_V 0.80 0.02
26_V 57_S 0.80 0.02
73_W 87_R 0.80 0.02
11_A 92_K 0.80 0.02
12_V 94_A 0.80 0.02
96_N 29_T 0.80 0.02
111_S 41_E 0.80 0.01
87_T 36_A 0.79 0.01
81_P 15_E 0.79 0.01
88_Q 84_E 0.79 0.01
94_T 42_L 0.78 0.01
111_S 35_R 0.78 0.01
26_V 39_L 0.78 0.01
59_L 52_K 0.78 0.01
37_Y 58_R 0.77 0.01
84_E 24_L 0.77 0.01
83_H 62_L 0.77 0.01
110_L 66_V 0.77 0.01
50_M 54_G 0.77 0.01
111_S 95_N 0.77 0.01
87_T 57_S 0.77 0.01
109_A 7_V 0.77 0.01
59_L 16_K 0.76 0.01
68_F 33_A 0.76 0.01
74_F 57_S 0.76 0.01
94_T 39_L 0.76 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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