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MREB - NIFU
UniProt: P0A9X4 - P0ACD4
Length: 475
Sequences: 288
Seq/Len: 0.65
I_Prob: 0.97

MREB - Rod shape-determining protein MreB
Paralog alert: 0.79 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: DNAK HSCA HSCC MREB YEGD
NIFU - NifU-like protein
Paralog alert: 0.07 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NIFU
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
21_N 57_R 2.67 0.97
149_I 108_I 1.86 0.72
105_R 57_R 1.67 0.57
320_D 91_T 1.57 0.48
223_G 49_D 1.57 0.48
198_I 108_I 1.47 0.38
319_E 118_I 1.42 0.33
149_I 20_F 1.40 0.32
253_S 8_I 1.39 0.30
104_M 50_E 1.36 0.28
257_L 81_S 1.32 0.25
220_H 29_S 1.30 0.23
274_A 87_A 1.25 0.20
198_I 121_Y 1.24 0.19
149_I 87_A 1.23 0.19
283_A 8_I 1.20 0.17
175_V 5_E 1.19 0.16
95_I 125_R 1.18 0.16
31_I 57_R 1.18 0.15
34_N 28_G 1.16 0.14
65_R 28_G 1.16 0.14
108_P 119_A 1.13 0.13
34_N 118_I 1.12 0.12
314_P 52_I 1.12 0.12
270_A 86_Q 1.07 0.10
80_V 49_D 1.05 0.09
63_L 104_I 1.04 0.09
275_L 20_F 1.03 0.08
290_G 73_V 1.02 0.08
308_M 125_R 1.02 0.08
290_G 86_Q 1.01 0.08
252_N 50_E 1.01 0.08
300_L 118_I 1.01 0.08
75_P 29_S 1.00 0.08
281_E 84_E 1.00 0.07
173_V 84_E 0.99 0.07
255_E 126_E 0.99 0.07
93_H 92_D 0.99 0.07
216_E 81_S 0.99 0.07
92_Q 77_V 0.99 0.07
203_R 22_N 0.98 0.07
305_R 23_N 0.98 0.07
306_L 5_E 0.98 0.07
223_G 26_N 0.98 0.07
127_R 120_D 0.98 0.07
141_I 8_I 0.98 0.07
261_Q 48_N 0.98 0.07
108_P 22_N 0.97 0.07
303_L 82_L 0.96 0.06
218_I 86_Q 0.96 0.06
130_A 61_Y 0.96 0.06
320_D 8_I 0.96 0.06
300_L 49_D 0.94 0.06
179_N 118_I 0.94 0.06
133_A 28_G 0.94 0.06
80_V 26_N 0.94 0.06
293_L 124_K 0.94 0.06
297_G 86_Q 0.93 0.05
223_G 23_N 0.93 0.05
196_E 5_E 0.93 0.05
248_G 26_N 0.92 0.05
125_A 29_S 0.91 0.05
213_A 26_N 0.91 0.05
81_I 118_I 0.91 0.05
149_I 19_S 0.91 0.05
206_Y 82_L 0.91 0.05
216_E 125_R 0.91 0.05
31_I 82_L 0.90 0.05
278_C 94_A 0.90 0.05
92_Q 50_E 0.90 0.05
323_T 5_E 0.90 0.05
206_Y 50_E 0.90 0.05
136_R 82_L 0.90 0.05
211_G 22_N 0.89 0.04
251_L 122_K 0.89 0.04
63_L 91_T 0.89 0.04
216_E 98_E 0.89 0.04
216_E 25_E 0.89 0.04
264_L 83_D 0.89 0.04
21_N 125_R 0.89 0.04
305_R 27_V 0.88 0.04
163_V 77_V 0.88 0.04
266_G 82_L 0.88 0.04
38_V 91_T 0.88 0.04
254_N 83_D 0.87 0.04
103_F 91_T 0.87 0.04
67_P 123_S 0.86 0.04
175_V 123_S 0.86 0.04
323_T 86_Q 0.86 0.04
75_P 98_E 0.86 0.04
163_V 119_A 0.85 0.04
149_I 26_N 0.85 0.04
50_K 92_D 0.85 0.04
323_T 27_V 0.85 0.04
302_N 73_V 0.85 0.04
198_I 89_K 0.84 0.04
50_K 50_E 0.84 0.04
258_E 84_E 0.84 0.04
202_V 119_A 0.84 0.03
66_T 28_G 0.84 0.03
177_S 48_N 0.83 0.03
70_I 89_K 0.83 0.03
55_V 23_N 0.83 0.03
202_V 81_S 0.83 0.03
109_R 61_Y 0.83 0.03
194_F 88_I 0.83 0.03
202_V 125_R 0.83 0.03
61_Q 25_E 0.83 0.03
82_A 42_K 0.83 0.03
62_M 126_E 0.83 0.03
267_I 42_K 0.83 0.03
209_L 125_R 0.83 0.03
108_P 91_T 0.83 0.03
158_A 52_I 0.83 0.03
186_S 19_S 0.82 0.03
213_A 81_S 0.82 0.03
276_E 98_E 0.82 0.03
184_S 61_Y 0.82 0.03
211_G 86_Q 0.82 0.03
31_I 50_E 0.82 0.03
223_G 125_R 0.82 0.03
72_A 42_K 0.82 0.03
125_A 42_K 0.82 0.03
21_N 119_A 0.81 0.03
248_G 8_I 0.81 0.03
135_A 28_G 0.81 0.03
133_A 120_D 0.81 0.03
44_D 25_E 0.81 0.03
75_P 50_E 0.81 0.03
306_L 27_V 0.81 0.03
80_V 122_K 0.81 0.03
270_A 48_N 0.81 0.03
161_S 73_V 0.81 0.03
271_V 88_I 0.81 0.03
234_I 8_I 0.81 0.03
24_I 8_I 0.80 0.03
60_K 84_E 0.80 0.03
314_P 81_S 0.80 0.03
67_P 87_A 0.80 0.03
213_A 119_A 0.80 0.03
214_T 50_E 0.80 0.03
109_R 31_M 0.80 0.03
124_R 29_S 0.80 0.03
309_E 125_R 0.80 0.03
108_P 118_I 0.80 0.03
125_A 108_I 0.80 0.03
124_R 104_I 0.79 0.03
234_I 98_E 0.79 0.03
300_L 82_L 0.79 0.03
71_A 125_R 0.79 0.03
290_G 19_S 0.79 0.03
131_Q 104_I 0.79 0.03
258_E 57_R 0.79 0.03
318_A 108_I 0.79 0.03
61_Q 123_S 0.79 0.03
92_Q 125_R 0.79 0.03
55_V 49_D 0.79 0.03
257_L 123_S 0.78 0.03
251_L 98_E 0.78 0.03
279_P 82_L 0.78 0.03
128_E 120_D 0.78 0.03
30_G 25_E 0.78 0.03
135_A 45_I 0.78 0.03
74_R 84_E 0.78 0.03
216_E 104_I 0.78 0.03
220_H 104_I 0.78 0.03
187_V 86_Q 0.77 0.02
237_R 126_E 0.77 0.02
330_G 48_N 0.77 0.02
28_G 121_Y 0.77 0.02
220_H 98_E 0.77 0.02
92_Q 23_N 0.76 0.02
43_Q 26_N 0.76 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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