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QMCA - YBBJ
UniProt: P0AA53 - P0AAS3
Length: 457
Sequences: 684
Seq/Len: 1.54
I_Prob: 0.91

QMCA - Protein QmcA
Paralog alert: 0.58 [within 20: 0.30] - ratio of genomes with paralogs
Cluster includes: HFLC QMCA
YBBJ - Inner membrane protein YbbJ
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YBBJ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
145_E 115_R 1.96 0.91
36_R 113_H 1.58 0.72
37_Y 123_V 1.28 0.45
11_V 44_L 1.24 0.41
86_V 39_A 1.22 0.38
52_M 9_P 1.21 0.37
68_I 14_L 1.20 0.37
91_V 32_L 1.20 0.36
12_A 66_L 1.15 0.32
12_A 61_A 1.14 0.31
124_E 21_L 1.10 0.28
182_K 142_G 1.07 0.24
164_P 121_W 1.05 0.23
75_S 30_G 1.05 0.23
20_V 78_R 1.03 0.22
193_R 35_S 1.03 0.21
264_Q 145_L 1.02 0.21
129_L 34_W 1.01 0.20
239_V 26_L 1.00 0.19
206_S 117_G 0.99 0.18
127_E 65_L 0.98 0.18
119_V 103_L 0.98 0.17
89_I 32_L 0.97 0.17
51_F 116_V 0.96 0.16
11_V 18_G 0.96 0.16
258_K 124_S 0.95 0.16
243_I 20_L 0.95 0.16
280_E 29_N 0.95 0.16
237_K 77_R 0.94 0.15
182_K 23_A 0.93 0.15
8_L 149_A 0.92 0.14
31_V 29_N 0.92 0.14
52_M 33_L 0.92 0.14
12_A 65_L 0.92 0.14
51_F 105_S 0.91 0.13
149_P 119_S 0.90 0.13
92_I 142_G 0.89 0.12
20_V 105_S 0.89 0.12
162_V 35_S 0.89 0.12
40_T 27_G 0.89 0.12
129_L 116_V 0.89 0.12
223_E 60_F 0.88 0.12
160_R 101_F 0.88 0.12
51_F 16_L 0.87 0.12
103_N 12_F 0.87 0.11
190_E 56_Q 0.87 0.11
212_E 67_A 0.86 0.11
108_I 42_T 0.86 0.11
277_M 35_S 0.85 0.11
206_S 62_I 0.85 0.10
127_E 95_Q 0.85 0.10
195_A 45_V 0.85 0.10
205_Q 137_V 0.85 0.10
49_V 44_L 0.84 0.10
16_V 18_G 0.84 0.10
171_S 63_L 0.84 0.10
66_L 33_L 0.84 0.10
47_L 102_V 0.83 0.10
19_G 22_A 0.83 0.09
123_M 23_A 0.82 0.09
148_N 143_I 0.82 0.09
58_K 16_L 0.82 0.09
47_L 54_E 0.82 0.09
282_S 61_A 0.82 0.09
160_R 19_L 0.82 0.09
128_M 118_D 0.81 0.09
91_V 103_L 0.81 0.09
216_Q 67_A 0.81 0.09
162_V 28_G 0.81 0.09
165_P 60_F 0.81 0.09
97_A 20_L 0.81 0.09
102_S 22_A 0.81 0.09
288_I 70_L 0.81 0.09
14_V 45_V 0.81 0.09
31_V 64_T 0.81 0.09
45_L 28_G 0.81 0.09
58_K 134_H 0.81 0.09
52_M 57_G 0.81 0.09
21_K 137_V 0.81 0.08
52_M 149_A 0.81 0.08
139_L 31_Y 0.81 0.08
96_R 33_L 0.80 0.08
37_Y 147_I 0.80 0.08
152_I 16_L 0.80 0.08
268_S 109_N 0.80 0.08
11_V 83_K 0.80 0.08
20_V 93_G 0.80 0.08
237_K 138_I 0.80 0.08
36_R 133_T 0.79 0.08
93_D 94_Q 0.79 0.08
168_L 118_D 0.79 0.08
199_K 52_G 0.78 0.07
154_V 95_Q 0.78 0.07
83_I 30_G 0.78 0.07
213_G 32_L 0.77 0.07
49_V 55_W 0.77 0.07
162_V 29_N 0.77 0.07
12_A 16_L 0.77 0.07
15_I 83_K 0.77 0.07
6_P 80_R 0.77 0.07
160_R 122_P 0.77 0.07
289_A 65_L 0.76 0.07
231_A 124_S 0.76 0.07
232_E 141_E 0.76 0.07
66_L 137_V 0.76 0.07
62_M 119_S 0.75 0.07
45_L 36_G 0.75 0.07
9_I 47_W 0.75 0.06
42_Q 40_V 0.75 0.06
52_M 137_V 0.75 0.06
36_R 138_I 0.75 0.06
5_I 49_V 0.75 0.06
138_R 137_V 0.75 0.06
93_D 24_E 0.75 0.06
208_I 13_W 0.74 0.06
179_E 114_M 0.74 0.06
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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