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ATP6 - ATPF
UniProt: P0AB98 - P0ABA0
Length: 427
Sequences: 929
Seq/Len: 2.27
I_Prob: 1.00

ATP6 - ATP synthase subunit a
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATP6
ATPF - ATP synthase subunit b
Paralog alert: 0.13 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: ATPF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_K 34_E 3.00 1.00
149_V 10_Q 1.68 0.93
77_T 33_I 1.66 0.92
53_G 13_A 1.50 0.86
155_L 11_A 1.37 0.78
50_V 13_A 1.29 0.72
255_I 139_S 1.24 0.68
243_I 20_F 1.21 0.65
49_S 10_Q 1.21 0.64
263_Y 21_C 1.20 0.64
239_V 16_L 1.19 0.63
111_W 10_Q 1.19 0.62
125_L 11_A 1.14 0.57
196_E 17_F 1.08 0.50
152_S 7_I 1.07 0.50
148_N 4_N 1.07 0.49
120_L 40_I 1.05 0.47
74_K 37_Q 1.04 0.46
84_G 39_E 1.03 0.45
190_P 56_L 1.02 0.43
64_A 135_I 1.01 0.42
60_F 25_V 1.00 0.41
165_S 114_K 1.00 0.41
70_G 32_A 1.00 0.41
254_F 123_Q 0.97 0.38
112_V 143_A 0.97 0.37
206_S 152_L 0.97 0.37
119_D 117_R 0.96 0.37
244_F 32_A 0.96 0.36
176_K 34_E 0.95 0.35
57_L 20_F 0.94 0.34
83_I 30_M 0.94 0.34
208_G 102_V 0.93 0.32
55_L 104_Q 0.93 0.32
196_E 50_A 0.92 0.32
81_L 37_Q 0.92 0.32
268_S 135_I 0.92 0.32
106_L 26_W 0.91 0.31
64_A 24_Y 0.91 0.30
199_S 113_R 0.91 0.30
174_F 133_E 0.91 0.30
204_P 72_A 0.90 0.30
63_V 33_I 0.89 0.29
199_S 17_F 0.89 0.28
164_Y 32_A 0.89 0.28
82_V 110_E 0.88 0.28
9_Q 29_L 0.87 0.26
255_I 125_A 0.86 0.26
243_I 17_F 0.86 0.25
204_P 68_A 0.85 0.24
99_K 34_E 0.84 0.24
45_S 6_T 0.84 0.23
151_L 11_A 0.84 0.23
64_A 29_L 0.83 0.23
269_E 85_Q 0.83 0.22
60_F 26_W 0.83 0.22
208_G 9_G 0.82 0.22
265_S 134_K 0.82 0.22
58_V 96_Q 0.82 0.21
240_P 16_L 0.82 0.21
67_A 32_A 0.82 0.21
228_L 135_I 0.82 0.21
55_L 49_R 0.81 0.21
105_A 112_E 0.81 0.21
82_V 49_R 0.81 0.21
182_P 17_F 0.80 0.20
196_E 21_C 0.80 0.20
78_A 125_A 0.80 0.19
110_V 78_Q 0.79 0.19
221_I 94_A 0.79 0.19
91_K 20_F 0.79 0.19
115_M 86_I 0.79 0.19
78_A 154_A 0.79 0.19
45_S 143_A 0.78 0.18
258_V 77_E 0.78 0.18
262_V 57_A 0.78 0.18
54_L 130_A 0.78 0.18
46_M 63_D 0.78 0.18
149_V 18_V 0.77 0.18
122_P 14_F 0.77 0.17
88_G 71_E 0.77 0.17
77_T 102_V 0.77 0.17
250_T 128_A 0.77 0.17
78_A 76_I 0.77 0.17
152_S 34_E 0.77 0.17
41_I 5_A 0.76 0.17
85_F 27_P 0.76 0.17
244_F 132_A 0.76 0.16
64_A 26_W 0.76 0.16
49_S 6_T 0.75 0.16
263_Y 6_T 0.75 0.16
88_G 63_D 0.75 0.16
155_L 148_I 0.75 0.16
201_L 75_I 0.74 0.15
60_F 21_C 0.74 0.15
176_K 33_I 0.74 0.15
243_I 29_L 0.74 0.15
244_F 20_F 0.74 0.15
8_P 63_D 0.74 0.15
122_P 44_L 0.74 0.15
224_L 61_A 0.74 0.15
240_P 11_A 0.74 0.15
243_I 104_Q 0.74 0.15
201_L 130_A 0.73 0.15
187_A 118_E 0.73 0.15
110_V 60_S 0.73 0.15
37_T 83_R 0.73 0.14
51_V 44_L 0.73 0.14
217_A 145_N 0.73 0.14
154_A 81_K 0.73 0.14
66_K 68_A 0.73 0.14
255_I 64_Q 0.73 0.14
95_H 1_M 0.73 0.14
229_L 24_Y 0.73 0.14
263_Y 23_K 0.73 0.14
104_L 53_D 0.73 0.14
82_V 63_D 0.72 0.14
270_E 133_E 0.72 0.14
65_K 148_I 0.72 0.14
83_I 112_E 0.72 0.14
8_P 16_L 0.72 0.14
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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