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CCMD - NRFF
UniProt: P0ABM5 - P32711
Length: 196
Sequences: 180
Seq/Len: 0.96
I_Prob: 0.58

CCMD - Heme exporter protein D
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CCMD
NRFF - Formate-dependent nitrite reductase complex subunit NrfF
Paralog alert: 0.50 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NRFF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
57_E 22_D 1.91 0.58
5_F 45_P 1.77 0.47
5_F 26_F 1.64 0.36
56_R 26_F 1.55 0.30
18_A 51_N 1.53 0.29
52_Q 112_L 1.48 0.25
52_Q 22_D 1.39 0.19
5_F 46_Q 1.38 0.19
15_G 60_A 1.36 0.18
32_L 60_A 1.35 0.17
62_A 58_P 1.25 0.13
40_V 28_N 1.22 0.11
18_A 41_Q 1.19 0.10
12_F 98_L 1.18 0.10
59_R 52_L 1.18 0.10
53_Q 70_M 1.13 0.08
11_F 82_G 1.12 0.08
51_A 111_V 1.09 0.07
64_Q 57_A 1.09 0.07
53_Q 59_V 1.08 0.07
3_P 57_A 1.07 0.07
59_R 84_M 1.06 0.06
32_L 79_E 1.05 0.06
27_M 113_L 1.04 0.06
39_S 56_N 1.04 0.06
6_A 61_V 1.03 0.06
26_V 32_Q 1.01 0.05
58_A 17_H 1.00 0.05
56_R 38_I 1.00 0.05
54_R 63_M 1.00 0.05
27_M 56_N 1.00 0.05
19_F 60_A 1.00 0.05
45_A 57_A 1.00 0.05
44_R 57_A 0.99 0.05
58_A 20_V 0.99 0.05
17_Y 60_A 0.99 0.05
29_V 36_L 0.98 0.05
37_V 20_V 0.98 0.05
18_A 73_E 0.98 0.05
53_Q 108_L 0.98 0.05
10_E 11_L 0.95 0.04
10_E 83_W 0.95 0.04
10_E 84_M 0.94 0.04
12_F 123_V 0.94 0.04
19_F 80_I 0.93 0.04
37_V 119_I 0.92 0.04
50_V 104_V 0.91 0.03
56_R 45_P 0.91 0.03
20_F 120_L 0.90 0.03
33_V 115_L 0.90 0.03
53_Q 84_M 0.90 0.03
40_V 27_A 0.89 0.03
61_R 59_V 0.89 0.03
16_G 97_P 0.89 0.03
57_E 57_A 0.89 0.03
17_Y 35_A 0.88 0.03
35_L 50_Q 0.88 0.03
20_F 33_Q 0.88 0.03
59_R 93_R 0.88 0.03
17_Y 75_K 0.88 0.03
10_E 8_L 0.88 0.03
49_G 21_V 0.88 0.03
51_A 81_I 0.88 0.03
6_A 98_L 0.87 0.03
55_A 100_G 0.86 0.03
13_A 80_I 0.86 0.03
8_W 34_Q 0.86 0.03
38_H 70_M 0.86 0.03
35_L 45_P 0.86 0.03
23_L 46_Q 0.85 0.03
16_G 107_A 0.85 0.03
7_S 82_G 0.84 0.03
49_G 110_V 0.84 0.03
67_E 35_A 0.84 0.03
5_F 68_Y 0.84 0.03
11_F 108_L 0.83 0.02
43_H 126_K 0.83 0.02
39_S 26_F 0.83 0.02
26_V 71_V 0.82 0.02
25_V 34_Q 0.82 0.02
59_R 66_Q 0.82 0.02
5_F 99_T 0.82 0.02
5_F 56_N 0.82 0.02
23_L 45_P 0.82 0.02
55_A 125_A 0.82 0.02
39_S 46_Q 0.82 0.02
56_R 39_A 0.81 0.02
15_G 83_W 0.81 0.02
25_V 51_N 0.81 0.02
36_V 117_A 0.81 0.02
10_E 75_K 0.81 0.02
39_S 99_T 0.80 0.02
36_V 110_V 0.80 0.02
35_L 46_Q 0.80 0.02
57_E 89_G 0.80 0.02
2_T 18_A 0.80 0.02
62_A 69_S 0.80 0.02
47_L 21_V 0.79 0.02
12_F 69_S 0.79 0.02
9_N 73_E 0.78 0.02
45_A 63_M 0.78 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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