GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
HINT - PABA
UniProt: P0ACE7 - P00903
Length: 306
Sequences: 287
Seq/Len: 0.96
I_Prob: 0.26

HINT - HIT-like protein HinT
Paralog alert: 0.30 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HINT
PABA - Para-aminobenzoate synthase glutamine amidotransferase component II
Paralog alert: 0.89 [within 20: 0.07] - ratio of genomes with paralogs
Cluster includes: HIS5 PABA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
104_L 116_R 1.76 0.26
105_L 154_G 1.20 0.06
6_I 38_D 1.15 0.05
62_L 185_L 1.08 0.04
62_L 5_I 1.08 0.04
70_A 4_L 1.01 0.03
92_H 49_I 0.99 0.03
76_E 4_L 0.97 0.02
94_G 39_I 0.94 0.02
54_V 86_A 0.94 0.02
65_M 131_V 0.94 0.02
58_H 185_L 0.93 0.02
86_I 65_V 0.91 0.02
94_G 5_I 0.90 0.02
42_I 43_K 0.90 0.02
25_L 5_I 0.89 0.02
74_E 147_S 0.88 0.02
47_L 162_L 0.88 0.02
91_R 181_L 0.87 0.02
6_I 49_I 0.87 0.01
11_I 65_V 0.85 0.01
94_G 2_I 0.84 0.01
42_I 163_E 0.83 0.01
48_I 70_A 0.82 0.01
29_F 46_K 0.82 0.01
11_I 82_H 0.82 0.01
80_E 143_V 0.82 0.01
64_R 117_G 0.81 0.01
62_L 150_R 0.81 0.01
76_E 28_V 0.81 0.01
97_V 45_Q 0.81 0.01
11_I 164_G 0.81 0.01
46_I 66_I 0.80 0.01
93_G 152_I 0.80 0.01
42_I 72_R 0.80 0.01
109_P 78_V 0.80 0.01
89_T 17_Q 0.80 0.01
110_L 78_V 0.79 0.01
105_L 65_V 0.79 0.01
19_I 73_L 0.78 0.01
42_I 16_Y 0.78 0.01
56_A 146_W 0.78 0.01
85_L 176_Q 0.77 0.01
24_D 91_G 0.77 0.01
42_I 63_L 0.77 0.01
102_M 116_R 0.77 0.01
104_L 114_V 0.76 0.01
53_D 139_A 0.76 0.01
9_K 76_L 0.76 0.01
24_D 119_A 0.75 0.01
69_A 180_L 0.75 0.01
3_E 22_L 0.75 0.01
21_Y 151_E 0.74 0.01
63_G 53_P 0.74 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.039 seconds.