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NUOA - NUON
UniProt: P0AFC3 - P0AFF0
Length: 632
Sequences: 821
Seq/Len: 1.54
I_Prob: 0.02

NUOA - NADH-quinone oxidoreductase subunit A
Paralog alert: 0.07 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: NUOA
NUON - NADH-quinone oxidoreductase subunit N
Paralog alert: 0.84 [within 20: 0.59] - ratio of genomes with paralogs
Cluster includes: HYCC HYFB HYFD HYFF NUOL NUOM NUON
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3rkoND:MC:LB:AEContact Map
4he8LF:MG:NI:ABContact Map


Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
31_L 289_L 1.32 0.02
33_G 367_W 1.11 0.01
112_A 441_G 1.09 0.01
91_S 181_S 1.05 0.01
73_M 247_K 1.05 0.01
58_G 303_I 1.01 0.01
31_L 432_L 1.01 0.01
16_F 221_V 1.00 0.01
31_L 326_V 0.96 0.01
108_F 436_A 0.95 0.01
73_M 284_G 0.93 0.01
21_I 412_G 0.93 0.01
115_V 378_V 0.92 0.01
115_V 73_A 0.92 0.01
72_A 461_A 0.92 0.01
115_V 462_L 0.91 0.01
87_A 381_L 0.91 0.01
121_G 189_L 0.90 0.01
86_F 173_G 0.87 0.01
86_F 290_S 0.86 0.01
124_D 85_L 0.86 0.01
103_A 388_M 0.86 0.01
25_G 386_I 0.85 0.01
82_A 92_Y 0.85 0.01
34_G 327_G 0.85 0.01
107_I 436_A 0.85 0.01
43_A 417_G 0.85 0.01
77_I 379_M 0.85 0.01
55_D 384_A 0.85 0.01
44_R 370_P 0.84 0.01
12_H 287_M 0.84 0.01
68_F 326_V 0.84 0.01
96_G 401_V 0.84 0.01
15_A 228_P 0.84 0.01
32_V 344_V 0.84 0.01
124_D 96_E 0.83 0.01
112_A 469_V 0.83 0.01
72_A 387_P 0.83 0.01
100_F 325_A 0.83 0.01
20_L 367_W 0.82 0.01
108_F 212_V 0.82 0.01
98_V 282_I 0.81 0.01
29_L 275_I 0.81 0.01
29_L 464_V 0.80 0.01
33_G 183_D 0.80 0.01
12_H 393_I 0.80 0.01
112_A 208_G 0.80 0.01
91_S 179_A 0.80 0.01
40_R 188_A 0.79 0.01
60_A 183_D 0.79 0.01
52_S 152_S 0.78 0.01
20_L 416_V 0.78 0.01
65_S 247_K 0.78 0.01
86_F 311_V 0.78 0.01
109_V 80_V 0.77 0.01
28_C 275_I 0.77 0.01
94_E 469_V 0.77 0.01
122_A 207_F 0.77 0.01
100_F 310_L 0.76 0.01
28_C 458_L 0.76 0.01
40_R 69_V 0.76 0.01
47_N 137_L 0.76 0.01
68_F 156_S 0.76 0.00
91_S 171_L 0.76 0.00
80_V 130_L 0.76 0.00
61_R 357_D 0.76 0.00
66_A 205_A 0.76 0.00
68_F 250_I 0.75 0.00
122_A 339_G 0.75 0.00
38_G 401_V 0.75 0.00
71_V 122_A 0.75 0.00
22_V 272_V 0.74 0.00
26_L 146_A 0.74 0.00
37_L 409_W 0.74 0.00
15_A 432_L 0.74 0.00
76_V 262_P 0.74 0.00
99_G 386_I 0.74 0.00
62_L 414_V 0.73 0.00
120_I 84_S 0.73 0.00
124_D 390_L 0.73 0.00
15_A 247_K 0.73 0.00
106_F 341_F 0.73 0.00
23_A 77_T 0.73 0.00
20_L 278_F 0.72 0.00
34_G 260_Y 0.72 0.00
125_W 385_G 0.72 0.00
18_I 122_A 0.72 0.00
81_E 314_I 0.72 0.00
105_I 377_T 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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