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HPF - YRBA
UniProt: P0AFX0 - P0A9W6
Length: 179
Sequences: 127
Seq/Len: 0.71
I_Prob: 0.30

HPF - Ribosome hibernation promoting factor
Paralog alert: 0.26 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HPF RAIA
YRBA - Uncharacterized protein YrbA
Paralog alert: 0.81 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: BOLA YRBA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
54_L 76_A 1.91 0.30
10_V 12_N 1.69 0.18
12_I 31_I 1.36 0.07
14_E 15_S 1.31 0.06
40_V 24_D 1.27 0.05
85_L 23_G 1.24 0.05
17_R 6_I 1.23 0.04
78_I 2_E 1.19 0.04
61_I 71_T 1.18 0.04
5_I 76_A 1.17 0.04
29_Q 9_V 1.16 0.04
18_E 69_A 1.16 0.04
30_Y 49_V 1.16 0.04
3_L 79_R 1.15 0.03
58_G 49_V 1.14 0.03
18_E 45_K 1.13 0.03
47_T 65_V 1.12 0.03
12_I 35_E 1.12 0.03
21_T 66_S 1.11 0.03
24_F 13_A 1.10 0.03
53_T 28_F 1.09 0.03
83_R 33_V 1.07 0.03
41_L 77_R 1.07 0.03
18_E 74_E 1.07 0.03
34_I 46_Q 1.06 0.02
10_V 17_Q 1.05 0.02
59_G 69_A 1.05 0.02
49_T 30_V 1.04 0.02
60_E 66_S 1.04 0.02
11_E 34_G 1.03 0.02
39_V 4_N 1.03 0.02
14_E 65_V 1.00 0.02
88_H 25_G 1.00 0.02
59_G 49_V 1.00 0.02
30_Y 84_F 0.99 0.02
74_I 14_L 0.98 0.02
41_L 37_F 0.96 0.02
11_E 32_A 0.96 0.02
14_E 23_G 0.96 0.02
33_R 29_Q 0.94 0.01
30_Y 60_N 0.94 0.01
31_F 68_K 0.94 0.01
33_R 59_D 0.94 0.01
42_K 49_V 0.94 0.01
48_H 12_N 0.94 0.01
11_E 73_A 0.94 0.01
15_A 45_K 0.93 0.01
59_G 65_V 0.93 0.01
24_F 21_V 0.92 0.01
16_L 5_E 0.92 0.01
70_M 69_A 0.91 0.01
3_L 9_V 0.90 0.01
56_V 74_E 0.90 0.01
34_I 47_Q 0.90 0.01
85_L 10_L 0.89 0.01
46_V 33_V 0.89 0.01
16_L 49_V 0.88 0.01
47_T 48_T 0.88 0.01
60_E 47_Q 0.88 0.01
69_D 28_F 0.88 0.01
16_L 84_F 0.88 0.01
39_V 7_Q 0.88 0.01
26_K 42_R 0.86 0.01
86_T 60_N 0.85 0.01
26_K 30_V 0.85 0.01
82_A 83_G 0.85 0.01
39_V 73_A 0.84 0.01
6_T 34_G 0.84 0.01
49_T 51_G 0.84 0.01
41_L 74_E 0.84 0.01
58_G 58_A 0.84 0.01
26_K 52_P 0.84 0.01
40_V 15_S 0.83 0.01
32_D 53_L 0.83 0.01
83_R 46_Q 0.82 0.01
15_A 8_S 0.82 0.01
34_I 70_Y 0.82 0.01
62_H 37_F 0.82 0.01
19_F 83_G 0.82 0.01
85_L 61_R 0.82 0.01
50_S 37_F 0.82 0.01
52_A 21_V 0.82 0.01
59_G 50_Y 0.81 0.01
87_K 71_T 0.81 0.01
46_V 9_V 0.81 0.01
69_D 20_H 0.81 0.01
44_E 55_E 0.81 0.01
57_N 68_K 0.80 0.01
34_I 43_V 0.80 0.01
57_N 80_K 0.80 0.01
76_G 30_V 0.80 0.01
56_V 38_D 0.79 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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