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RIBF - TRUB
UniProt: P0AG40 - P60340
Length: 627
Sequences: 602
Seq/Len: 1.01
I_Prob: 0.00

RIBF - Riboflavin biosynthesis protein RibF
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RIBF
TRUB - tRNA pseudouridine synthase B
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TRUB
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
279_K 142_Q 1.20 0.00
134_E 180_I 1.17 0.00
178_L 103_F 1.05 0.00
259_H 195_A 1.04 0.00
280_I 218_H 1.01 0.00
21_T 194_G 0.99 0.00
187_H 12_N 0.98 0.00
201_L 174_C 0.97 0.00
57_P 308_L 0.97 0.00
188_P 219_L 0.94 0.00
212_V 64_K 0.94 0.00
57_P 293_G 0.93 0.00
147_Y 51_A 0.93 0.00
157_F 270_V 0.93 0.00
189_F 153_I 0.92 0.00
259_H 37_N 0.92 0.00
169_V 146_V 0.91 0.00
110_D 64_K 0.91 0.00
288_S 211_E 0.90 0.00
243_I 289_G 0.90 0.00
279_K 245_D 0.90 0.00
118_V 65_F 0.89 0.00
92_C 95_I 0.88 0.00
6_G 194_G 0.87 0.00
118_V 283_V 0.86 0.00
126_D 115_F 0.86 0.00
207_F 99_R 0.86 0.00
105_Q 95_I 0.85 0.00
148_G 51_A 0.85 0.00
261_L 32_V 0.85 0.00
136_D 150_A 0.85 0.00
242_N 184_I 0.84 0.00
121_L 108_L 0.84 0.00
296_I 40_R 0.83 0.00
242_N 158_L 0.83 0.00
276_L 51_A 0.83 0.00
276_L 30_Q 0.82 0.00
21_T 213_M 0.82 0.00
102_L 209_P 0.82 0.00
24_N 194_G 0.82 0.00
164_I 256_L 0.82 0.00
173_L 222_L 0.82 0.00
242_N 193_C 0.82 0.00
201_L 187_L 0.81 0.00
100_A 282_R 0.81 0.00
98_R 220_R 0.81 0.00
201_L 308_L 0.81 0.00
157_F 20_P 0.80 0.00
9_N 51_A 0.80 0.00
113_V 155_V 0.80 0.00
33_R 149_E 0.79 0.00
280_I 104_S 0.79 0.00
111_L 194_G 0.79 0.00
151_I 28_A 0.79 0.00
178_L 203_L 0.79 0.00
93_V 241_L 0.79 0.00
159_E 180_I 0.79 0.00
282_N 71_D 0.79 0.00
4_I 58_C 0.79 0.00
100_A 69_L 0.79 0.00
227_V 66_S 0.78 0.00
286_F 140_A 0.78 0.00
294_A 111_A 0.77 0.00
220_P 24_S 0.77 0.00
241_A 126_Y 0.77 0.00
108_I 64_K 0.76 0.00
20_L 187_L 0.76 0.00
75_L 131_Y 0.75 0.00
298_R 64_K 0.75 0.00
210_A 26_N 0.75 0.00
187_H 201_R 0.75 0.00
125_D 136_L 0.75 0.00
83_A 204_A 0.74 0.00
35_L 16_L 0.74 0.00
296_I 23_M 0.74 0.00
82_L 126_Y 0.74 0.00
135_G 158_L 0.73 0.00
119_K 108_L 0.73 0.00
300_E 57_I 0.73 0.00
47_N 103_F 0.73 0.00
286_F 60_G 0.73 0.00
156_T 136_L 0.73 0.00
125_D 51_A 0.73 0.00
296_I 183_I 0.73 0.00
95_F 124_S 0.73 0.00
148_G 106_E 0.73 0.00
193_G 26_N 0.73 0.00
294_A 212_R 0.72 0.00
82_L 310_V 0.72 0.00
87_V 103_F 0.72 0.00
156_T 58_C 0.72 0.00
17_G 31_K 0.72 0.00
56_E 293_G 0.72 0.00
272_I 135_K 0.72 0.00
270_R 60_G 0.72 0.00
75_L 44_T 0.72 0.00
88_D 49_P 0.72 0.00
269_G 17_L 0.72 0.00
164_I 124_S 0.72 0.00
111_L 51_A 0.71 0.00
198_G 174_C 0.71 0.00
280_I 277_L 0.71 0.00
256_L 103_F 0.71 0.00
28_V 256_L 0.71 0.00
166_S 174_C 0.71 0.00
195_V 14_V 0.71 0.00
111_L 36_Y 0.71 0.00
173_L 36_Y 0.71 0.00
249_V 185_D 0.70 0.00
235_K 218_H 0.70 0.00
131_A 115_F 0.70 0.00
44_R 95_I 0.70 0.00
294_A 57_I 0.70 0.00
188_P 98_E 0.70 0.00
133_R 78_V 0.70 0.00
126_D 174_C 0.70 0.00
108_I 111_A 0.70 0.00
159_E 175_S 0.69 0.00
261_L 41_A 0.69 0.00
173_L 219_L 0.69 0.00
121_L 131_Y 0.69 0.00
128_R 36_Y 0.69 0.00
160_G 57_I 0.69 0.00
20_L 168_L 0.69 0.00
210_A 248_A 0.69 0.00
75_L 108_L 0.69 0.00
22_I 79_I 0.69 0.00
283_E 58_C 0.69 0.00
24_N 139_Y 0.69 0.00
108_I 244_M 0.69 0.00
78_K 26_N 0.68 0.00
265_M 291_F 0.68 0.00
73_T 26_N 0.68 0.00
138_L 110_A 0.68 0.00
246_R 44_T 0.68 0.00
258_V 194_G 0.68 0.00
93_V 37_N 0.68 0.00
155_Q 100_P 0.68 0.00
25_F 136_L 0.68 0.00
274_V 295_G 0.68 0.00
279_K 23_M 0.68 0.00
153_S 104_S 0.68 0.00
44_R 271_R 0.68 0.00
277_R 64_K 0.68 0.00
246_R 144_I 0.68 0.00
160_G 120_E 0.67 0.00
183_S 106_E 0.67 0.00
214_L 20_P 0.67 0.00
85_C 243_P 0.67 0.00
276_L 206_S 0.67 0.00
153_S 204_A 0.67 0.00
217_Q 247_P 0.67 0.00
36_L 24_S 0.67 0.00
264_A 243_P 0.67 0.00
35_L 38_A 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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