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LPXB - RRF
UniProt: P10441 - P0A805
Length: 567
Sequences: 370
Seq/Len: 0.66
I_Prob: 0.01

LPXB - Lipid-A-disaccharide synthase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LPXB
RRF - Ribosome-recycling factor
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RRF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
377_V 78_V 1.66 0.01
111_K 117_V 1.34 0.01
381_A 158_D 1.27 0.01
118_I 127_A 1.22 0.01
332_C 169_K 1.21 0.01
59_E 181_E 1.21 0.01
381_A 75_S 1.20 0.00
106_L 157_Q 1.20 0.00
23_A 125_R 1.18 0.00
55_Y 71_D 1.18 0.00
333_E 159_D 1.17 0.00
66_V 19_A 1.17 0.00
93_V 85_S 1.13 0.00
381_A 171_I 1.12 0.00
59_E 117_V 1.11 0.00
263_E 152_D 1.10 0.00
139_A 78_V 1.08 0.00
41_V 123_Q 1.08 0.00
74_R 181_E 1.07 0.00
161_C 71_D 1.05 0.00
31_E 128_V 1.04 0.00
158_N 67_I 1.03 0.00
147_L 131_V 1.02 0.00
312_V 43_E 1.01 0.00
155_D 71_D 1.01 0.00
229_V 40_I 1.01 0.00
205_V 17_V 1.00 0.00
61_A 3_S 1.00 0.00
327_L 38_D 1.00 0.00
94_F 26_K 0.99 0.00
226_L 163_L 0.98 0.00
106_L 78_V 0.97 0.00
352_H 152_D 0.97 0.00
133_V 118_R 0.97 0.00
10_A 58_T 0.97 0.00
328_L 126_V 0.96 0.00
63_M 8_D 0.96 0.00
260_M 38_D 0.96 0.00
163_F 24_I 0.95 0.00
337_L 157_Q 0.95 0.00
319_A 55_A 0.95 0.00
8_T 52_R 0.95 0.00
369_A 83_M 0.94 0.00
228_I 57_V 0.94 0.00
328_L 149_S 0.94 0.00
63_M 65_L 0.94 0.00
147_L 102_L 0.93 0.00
67_E 104_P 0.93 0.00
42_A 112_D 0.93 0.00
284_L 179_E 0.92 0.00
109_N 19_A 0.92 0.00
327_L 126_V 0.92 0.00
337_L 66_K 0.92 0.00
167_T 100_V 0.92 0.00
272_L 40_I 0.91 0.00
161_C 69_V 0.91 0.00
156_K 181_E 0.91 0.00
68_V 185_F 0.91 0.00
242_E 168_I 0.91 0.00
25_L 47_T 0.90 0.00
212_F 185_F 0.90 0.00
90_K 19_A 0.90 0.00
253_S 152_D 0.90 0.00
270_A 171_I 0.90 0.00
167_T 20_F 0.89 0.00
309_T 62_S 0.89 0.00
331_E 128_V 0.89 0.00
271_A 137_D 0.89 0.00
67_E 130_N 0.88 0.00
299_T 131_V 0.88 0.00
46_M 68_N 0.88 0.00
74_R 109_R 0.87 0.00
111_K 143_L 0.87 0.00
271_A 16_C 0.87 0.00
84_K 128_V 0.87 0.00
76_L 142_L 0.87 0.00
339_A 152_D 0.86 0.00
95_V 185_F 0.86 0.00
54_W 126_V 0.86 0.00
265_M 106_T 0.86 0.00
244_I 36_L 0.86 0.00
10_A 157_Q 0.86 0.00
283_M 83_M 0.85 0.00
154_Y 15_K 0.85 0.00
73_R 149_S 0.85 0.00
26_I 125_R 0.85 0.00
331_E 139_V 0.85 0.00
71_R 127_A 0.85 0.00
60_L 108_E 0.85 0.00
327_L 65_L 0.85 0.00
41_V 35_S 0.85 0.00
75_L 65_L 0.84 0.00
225_D 57_V 0.84 0.00
259_G 42_V 0.84 0.00
41_V 57_V 0.84 0.00
61_A 22_T 0.84 0.00
304_K 36_L 0.83 0.00
59_E 102_L 0.83 0.00
140_T 175_L 0.83 0.00
157_Y 35_S 0.83 0.00
271_A 20_F 0.83 0.00
257_L 114_T 0.83 0.00
283_M 141_A 0.82 0.00
378_L 41_V 0.82 0.00
297_P 168_I 0.82 0.00
65_I 65_L 0.82 0.00
368_N 97_D 0.82 0.00
130_Q 125_R 0.82 0.00
133_V 33_S 0.82 0.00
211_D 116_I 0.82 0.00
77_H 78_V 0.82 0.00
9_I 36_L 0.81 0.00
59_E 169_K 0.81 0.00
59_E 109_R 0.81 0.00
319_A 139_V 0.81 0.00
57_M 180_A 0.81 0.00
139_A 171_I 0.81 0.00
138_R 171_I 0.81 0.00
222_T 171_I 0.81 0.00
332_C 80_K 0.81 0.00
297_P 183_M 0.81 0.00
49_E 40_I 0.81 0.00
120_Y 1_M 0.81 0.00
279_A 184_Q 0.80 0.00
256_L 17_V 0.80 0.00
136_I 86_D 0.80 0.00
232_L 109_R 0.80 0.00
111_K 98_I 0.80 0.00
251_D 171_I 0.79 0.00
354_M 27_I 0.79 0.00
16_T 111_K 0.79 0.00
57_M 168_I 0.79 0.00
63_M 59_V 0.79 0.00
143_V 109_R 0.79 0.00
354_M 71_D 0.79 0.00
350_T 125_R 0.79 0.00
161_C 169_K 0.79 0.00
110_L 128_V 0.79 0.00
47_Q 185_F 0.79 0.00
68_V 5_I 0.78 0.00
45_R 127_A 0.78 0.00
312_V 149_S 0.78 0.00
151_K 71_D 0.78 0.00
382_Q 17_V 0.78 0.00
206_E 127_A 0.78 0.00
270_A 128_V 0.78 0.00
22_G 131_V 0.78 0.00
63_M 12_R 0.78 0.00
37_R 166_A 0.77 0.00
220_R 173_A 0.77 0.00
159_V 180_A 0.77 0.00
20_I 49_T 0.77 0.00
192_H 73_S 0.77 0.00
115_I 38_D 0.77 0.00
315_P 23_Q 0.77 0.00
268_S 36_L 0.77 0.00
119_H 98_I 0.77 0.00
337_L 153_D 0.77 0.00
261_G 145_D 0.77 0.00
270_A 58_T 0.77 0.00
310_D 157_Q 0.77 0.00
11_L 59_V 0.77 0.00
268_S 75_S 0.77 0.00
216_A 112_D 0.77 0.00
38_F 175_L 0.77 0.00
193_C 24_I 0.77 0.00
307_V 67_I 0.77 0.00
146_F 104_P 0.76 0.00
28_A 141_A 0.76 0.00
131_K 83_M 0.76 0.00
22_G 175_L 0.76 0.00
12_V 51_L 0.76 0.00
198_P 151_D 0.76 0.00
174_L 56_S 0.76 0.00
343_P 128_V 0.76 0.00
230_V 168_I 0.76 0.00
278_A 15_K 0.76 0.00
153_F 65_L 0.76 0.00
101_D 150_E 0.76 0.00
240_Q 49_T 0.76 0.00
242_E 167_A 0.76 0.00
49_E 137_D 0.76 0.00
75_L 74_M 0.76 0.00
266_V 117_V 0.76 0.00
270_A 149_S 0.76 0.00
119_H 4_D 0.75 0.00
304_K 109_R 0.75 0.00
145_A 109_R 0.75 0.00
168_M 168_I 0.75 0.00
347_N 49_T 0.75 0.00
68_V 131_V 0.75 0.00
268_S 41_V 0.75 0.00
377_V 166_A 0.75 0.00
332_C 72_R 0.75 0.00
191_A 166_A 0.75 0.00
114_G 146_K 0.75 0.00
35_N 27_I 0.75 0.00
121_V 85_S 0.75 0.00
227_E 160_V 0.75 0.00
89_L 160_V 0.75 0.00
242_E 19_A 0.75 0.00
168_M 114_T 0.75 0.00
101_D 53_Q 0.75 0.00
48_A 4_D 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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