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RNH2 - YRDA
UniProt: P10442 - P0A9W9
Length: 382
Sequences: 233
Seq/Len: 0.71
I_Prob: 0.14

RNH2 - Ribonuclease HII
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RNH2
YRDA - Protein YrdA
Paralog alert: 0.62 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: CAIE MAA PAAY THGA WBBJ WCAF YRDA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
141_V 143_L 1.82 0.14
163_K 88_T 1.27 0.03
95_V 87_V 1.25 0.03
68_W 25_S 1.19 0.02
124_K 62_D 1.16 0.02
76_H 14_Q 1.14 0.02
150_L 21_I 1.12 0.02
169_F 93_V 1.08 0.02
185_R 20_M 1.04 0.01
112_C 52_V 1.04 0.01
63_E 74_Y 1.04 0.01
172_E 86_D 1.03 0.01
107_I 15_I 1.00 0.01
168_A 85_E 1.00 0.01
53_R 149_Q 0.99 0.01
103_E 31_V 0.98 0.01
13_A 52_V 0.97 0.01
92_Q 15_I 0.97 0.01
75_P 82_T 0.97 0.01
141_V 125_G 0.97 0.01
87_T 105_L 0.97 0.01
151_D 23_D 0.96 0.01
26_A 60_I 0.94 0.01
103_E 147_V 0.93 0.01
182_H 124_I 0.93 0.01
13_A 17_Q 0.92 0.01
133_S 37_V 0.92 0.01
40_I 44_V 0.92 0.01
133_S 110_S 0.91 0.01
37_A 27_V 0.90 0.01
26_A 107_G 0.90 0.01
107_I 152_P 0.90 0.01
85_H 27_V 0.89 0.01
151_D 151_R 0.89 0.01
74_E 117_I 0.89 0.01
173_K 111_I 0.89 0.01
29_T 48_D 0.88 0.01
74_E 135_R 0.88 0.01
171_L 35_D 0.88 0.01
52_K 69_T 0.88 0.01
71_G 40_W 0.87 0.01
157_Y 139_G 0.87 0.01
141_V 127_G 0.87 0.01
26_A 62_D 0.87 0.01
73_A 102_N 0.86 0.01
141_V 111_I 0.86 0.01
188_G 21_I 0.86 0.01
84_L 87_V 0.86 0.01
115_L 123_M 0.85 0.01
159_F 146_P 0.85 0.01
112_C 124_I 0.84 0.01
29_T 40_W 0.84 0.01
192_R 48_D 0.83 0.01
44_N 93_V 0.82 0.01
118_P 48_D 0.82 0.01
121_A 64_S 0.82 0.01
87_T 99_T 0.82 0.01
71_G 150_I 0.82 0.01
152_I 35_D 0.82 0.01
127_S 121_D 0.81 0.01
171_L 64_S 0.80 0.01
131_E 75_N 0.80 0.01
84_L 46_R 0.80 0.01
55_L 48_D 0.80 0.01
76_H 32_R 0.80 0.01
153_V 11_L 0.79 0.01
131_E 116_A 0.79 0.01
115_L 130_V 0.79 0.01
194_L 99_T 0.79 0.01
172_E 24_S 0.78 0.01
53_R 139_G 0.78 0.01
49_L 77_D 0.78 0.01
159_F 29_G 0.78 0.01
157_Y 31_V 0.78 0.01
36_P 63_G 0.78 0.01
105_V 109_G 0.78 0.01
133_S 151_R 0.78 0.01
67_S 18_R 0.77 0.01
67_S 117_I 0.77 0.01
115_L 105_L 0.77 0.01
68_W 98_C 0.77 0.01
69_S 118_V 0.77 0.01
156_Q 33_L 0.77 0.01
133_S 119_E 0.77 0.01
193_A 53_Q 0.77 0.01
173_K 135_R 0.77 0.01
72_R 150_I 0.76 0.01
44_N 53_Q 0.76 0.00
173_K 75_N 0.76 0.00
28_V 47_G 0.76 0.00
192_R 21_I 0.76 0.00
173_K 93_V 0.75 0.00
154_F 31_V 0.75 0.00
28_V 62_D 0.75 0.00
154_F 112_L 0.75 0.00
62_K 32_R 0.75 0.00
123_V 66_L 0.75 0.00
53_R 68_V 0.75 0.00
76_H 77_D 0.75 0.00
141_V 154_S 0.74 0.00
107_I 131_P 0.74 0.00
28_V 111_I 0.74 0.00
176_E 74_Y 0.74 0.00
101_A 30_D 0.74 0.00
24_V 105_L 0.74 0.00
173_K 98_C 0.73 0.00
117_M 19_V 0.73 0.00
177_H 26_V 0.73 0.00
129_V 31_V 0.72 0.00
157_Y 98_C 0.72 0.00
26_A 57_R 0.72 0.00
68_W 147_V 0.72 0.00
81_L 88_T 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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