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LPXK - YCAR
UniProt: P27300 - P0AAZ7
Length: 388
Sequences: 302
Seq/Len: 0.79
I_Prob: 0.45

LPXK - Tetraacyldisaccharide 4'-kinase
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: LPXK
YCAR - UPF0434 protein YcaR
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: YCAR
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
261_L 22_Q 1.93 0.45
298_E 38_L 1.51 0.18
27_S 45_L 1.38 0.12
75_R 36_F 1.32 0.10
135_L 1_M 1.28 0.09
215_A 4_R 1.22 0.07
295_F 10_A 1.21 0.07
303_L 30_K 1.19 0.06
121_V 4_R 1.18 0.06
181_M 15_N 1.17 0.06
302_Y 10_A 1.16 0.06
117_T 7_E 1.13 0.05
59_N 45_L 1.09 0.04
302_Y 45_L 1.07 0.04
2_I 20_Y 1.06 0.04
118_D 38_L 1.01 0.03
59_N 9_I 1.01 0.03
50_V 16_G 1.00 0.03
197_N 14_C 1.00 0.03
54_L 15_N 1.00 0.03
20_S 25_Q 1.00 0.03
119_A 41_G 0.99 0.03
247_T 30_K 0.99 0.03
258_C 33_N 0.98 0.03
62_T 34_L 0.97 0.03
296_A 10_A 0.97 0.03
226_V 28_I 0.97 0.03
51_V 36_F 0.97 0.03
185_A 53_L 0.97 0.03
266_S 36_F 0.96 0.03
143_I 31_L 0.95 0.03
218_L 1_M 0.94 0.02
261_L 9_I 0.93 0.02
234_A 16_G 0.93 0.02
114_Y 24_K 0.92 0.02
23_Y 33_N 0.91 0.02
30_I 15_N 0.90 0.02
254_Q 52_V 0.90 0.02
55_T 2_D 0.90 0.02
229_L 49_E 0.90 0.02
270_A 20_Y 0.88 0.02
21_W 54_T 0.88 0.02
23_Y 39_R 0.88 0.02
4_K 39_R 0.88 0.02
11_P 40_D 0.87 0.02
309_L 20_Y 0.86 0.02
299_N 45_L 0.86 0.02
304_P 7_E 0.86 0.02
24_G 7_E 0.86 0.02
317_L 33_N 0.85 0.02
283_V 19_W 0.85 0.02
123_V 37_P 0.85 0.02
111_V 19_W 0.84 0.02
115_Q 15_N 0.84 0.01
43_R 41_G 0.83 0.01
245_F 41_G 0.83 0.01
174_W 38_L 0.83 0.01
116_R 30_K 0.83 0.01
218_L 45_L 0.83 0.01
153_Y 8_I 0.82 0.01
142_Q 44_V 0.82 0.01
133_A 51_R 0.81 0.01
7_S 4_R 0.81 0.01
27_S 9_I 0.81 0.01
253_V 31_L 0.81 0.01
184_R 45_L 0.81 0.01
126_V 23_E 0.81 0.01
239_G 28_I 0.80 0.01
46_V 24_K 0.80 0.01
297_E 45_L 0.79 0.01
165_D 5_L 0.79 0.01
313_E 15_N 0.79 0.01
27_S 31_L 0.79 0.01
270_A 55_A 0.79 0.01
28_G 36_F 0.79 0.01
97_L 2_D 0.79 0.01
54_L 4_R 0.79 0.01
125_P 10_A 0.79 0.01
31_R 16_G 0.79 0.01
153_Y 22_Q 0.79 0.01
300_W 45_L 0.79 0.01
81_V 47_E 0.79 0.01
37_K 14_C 0.79 0.01
188_L 53_L 0.78 0.01
143_I 17_K 0.78 0.01
313_E 4_R 0.78 0.01
46_V 30_K 0.78 0.01
236_A 41_G 0.78 0.01
114_Y 48_T 0.78 0.01
82_V 4_R 0.78 0.01
175_W 45_L 0.77 0.01
251_C 45_L 0.77 0.01
20_S 13_V 0.77 0.01
102_T 40_D 0.76 0.01
111_V 48_T 0.76 0.01
14_R 55_A 0.76 0.01
206_I 15_N 0.76 0.01
40_R 33_N 0.76 0.01
162_V 29_C 0.76 0.01
146_T 3_H 0.76 0.01
74_Q 28_I 0.76 0.01
273_S 52_V 0.76 0.01
258_C 9_I 0.76 0.01
197_N 29_C 0.76 0.01
175_W 39_R 0.75 0.01
142_Q 5_L 0.75 0.01
271_D 9_I 0.75 0.01
265_Q 15_N 0.75 0.01
191_V 48_T 0.75 0.01
271_D 55_A 0.75 0.01
259_V 45_L 0.74 0.01
246_A 36_F 0.74 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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