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NRFE - NRFF
UniProt: P32710 - P32711
Length: 679
Sequences: 407
Seq/Len: 0.61
I_Prob: 0.27

NRFE - Cytochrome c-type biogenesis protein NrfE
Paralog alert: 0.46 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CCMF NRFE
NRFF - Formate-dependent nitrite reductase complex subunit NrfF
Paralog alert: 0.50 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NRFF
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
232_L 108_L 1.96 0.27
350_V 108_L 1.46 0.07
36_A 95_N 1.41 0.06
405_V 118_L 1.37 0.06
68_L 76_N 1.37 0.06
32_L 38_I 1.36 0.05
153_I 46_Q 1.36 0.05
74_G 52_L 1.25 0.04
485_A 51_N 1.25 0.04
431_L 80_I 1.25 0.04
89_W 94_Y 1.25 0.04
399_V 34_Q 1.22 0.03
47_S 59_V 1.20 0.03
134_F 46_Q 1.19 0.03
282_V 38_I 1.17 0.03
388_I 50_Q 1.17 0.03
36_A 63_M 1.17 0.03
514_D 52_L 1.16 0.03
281_L 91_F 1.16 0.03
67_K 59_V 1.16 0.03
233_L 38_I 1.14 0.03
153_I 45_P 1.14 0.03
153_I 58_P 1.13 0.03
53_Y 52_L 1.12 0.02
71_V 54_E 1.12 0.02
110_A 119_I 1.11 0.02
350_V 112_L 1.10 0.02
505_A 112_L 1.08 0.02
517_A 45_P 1.07 0.02
286_A 79_E 1.07 0.02
429_L 71_V 1.06 0.02
403_A 94_Y 1.05 0.02
322_A 45_P 1.05 0.02
414_A 111_V 1.04 0.02
259_L 52_L 1.03 0.02
372_Y 52_L 1.03 0.02
486_R 67_V 1.02 0.02
29_Q 57_A 1.01 0.02
527_R 68_Y 1.01 0.02
509_E 91_F 1.01 0.01
232_L 56_N 1.01 0.01
490_M 26_F 1.00 0.01
246_S 35_A 1.00 0.01
87_S 118_L 0.99 0.01
356_M 54_E 0.99 0.01
387_V 97_P 0.99 0.01
398_R 52_L 0.99 0.01
36_A 37_N 0.99 0.01
161_L 21_V 0.96 0.01
153_I 94_Y 0.96 0.01
47_S 93_R 0.95 0.01
535_L 92_V 0.95 0.01
459_S 73_E 0.95 0.01
366_L 60_A 0.95 0.01
102_D 119_I 0.95 0.01
359_G 102_T 0.94 0.01
410_V 30_Q 0.93 0.01
31_A 98_L 0.93 0.01
414_A 114_L 0.93 0.01
542_L 115_L 0.93 0.01
190_C 24_W 0.92 0.01
495_I 63_M 0.92 0.01
473_I 79_E 0.92 0.01
506_V 119_I 0.91 0.01
347_I 66_Q 0.91 0.01
248_T 94_Y 0.91 0.01
527_R 26_F 0.91 0.01
245_L 94_Y 0.91 0.01
490_M 94_Y 0.91 0.01
237_S 83_W 0.90 0.01
5_L 83_W 0.90 0.01
410_V 115_L 0.90 0.01
42_Y 112_L 0.90 0.01
384_M 67_V 0.90 0.01
530_W 42_L 0.90 0.01
146_M 65_H 0.89 0.01
503_W 38_I 0.89 0.01
406_A 113_L 0.89 0.01
395_S 94_Y 0.89 0.01
366_L 107_A 0.89 0.01
354_Y 102_T 0.89 0.01
210_W 42_L 0.88 0.01
489_Q 29_P 0.88 0.01
399_V 93_R 0.88 0.01
366_L 49_N 0.88 0.01
89_W 26_F 0.88 0.01
354_Y 50_Q 0.88 0.01
237_S 41_Q 0.88 0.01
67_K 51_N 0.88 0.01
323_V 59_V 0.87 0.01
6_T 67_V 0.87 0.01
538_A 115_L 0.87 0.01
37_F 90_D 0.87 0.01
36_A 65_H 0.86 0.01
323_V 46_Q 0.86 0.01
469_H 17_H 0.86 0.01
337_T 52_L 0.86 0.01
96_H 69_S 0.86 0.01
172_V 62_S 0.86 0.01
196_P 84_M 0.86 0.01
435_Q 116_M 0.86 0.01
20_R 119_I 0.86 0.01
417_V 60_A 0.86 0.01
466_L 69_S 0.86 0.01
423_S 112_L 0.86 0.01
535_L 101_Q 0.86 0.01
393_F 120_L 0.86 0.01
516_Y 53_L 0.85 0.01
282_V 34_Q 0.85 0.01
135_P 102_T 0.85 0.01
486_R 71_V 0.85 0.01
441_G 80_I 0.85 0.01
360_L 80_I 0.84 0.01
323_V 50_Q 0.84 0.01
168_V 80_I 0.84 0.01
68_L 118_L 0.84 0.01
383_L 60_A 0.84 0.01
282_V 77_E 0.83 0.01
506_V 35_A 0.83 0.01
372_Y 103_L 0.83 0.01
142_D 39_A 0.83 0.01
521_Y 59_V 0.83 0.01
388_I 84_M 0.83 0.01
419_V 94_Y 0.83 0.01
527_R 31_Q 0.83 0.01
499_G 111_V 0.83 0.01
473_I 31_Q 0.83 0.01
368_V 93_R 0.83 0.01
7_A 63_M 0.83 0.01
281_L 49_N 0.83 0.01
4_P 18_A 0.82 0.01
444_F 102_T 0.82 0.01
88_A 112_L 0.82 0.01
547_G 92_V 0.82 0.01
339_L 98_L 0.82 0.01
260_L 81_I 0.82 0.01
160_Y 47_C 0.82 0.01
125_L 103_L 0.82 0.01
413_F 45_P 0.82 0.01
323_V 29_P 0.82 0.01
142_D 42_L 0.81 0.01
489_Q 46_Q 0.81 0.01
399_V 35_A 0.81 0.01
223_F 49_N 0.81 0.01
386_V 76_N 0.81 0.01
89_W 24_W 0.81 0.01
103_P 85_T 0.81 0.01
14_R 125_A 0.81 0.01
197_G 51_N 0.80 0.01
6_T 113_L 0.80 0.01
343_A 113_L 0.80 0.01
535_L 108_L 0.80 0.01
70_A 94_Y 0.79 0.01
74_G 39_A 0.79 0.01
406_A 107_A 0.79 0.01
312_Y 63_M 0.79 0.01
62_L 94_Y 0.79 0.01
416_G 48_Q 0.79 0.01
70_A 52_L 0.79 0.01
370_A 56_N 0.79 0.01
242_L 37_N 0.79 0.01
365_R 66_Q 0.78 0.01
347_I 31_Q 0.78 0.01
36_A 76_N 0.78 0.01
26_I 101_Q 0.78 0.01
462_A 56_N 0.78 0.01
186_C 93_R 0.78 0.01
449_L 45_P 0.78 0.01
33_L 93_R 0.78 0.01
375_R 73_E 0.78 0.01
270_L 49_N 0.78 0.01
71_V 79_E 0.78 0.01
488_Q 80_I 0.78 0.01
366_L 93_R 0.78 0.01
347_I 99_T 0.78 0.01
361_L 54_E 0.78 0.01
372_Y 66_Q 0.78 0.01
237_S 54_E 0.78 0.01
304_I 63_M 0.78 0.01
304_I 53_L 0.77 0.01
90_S 37_N 0.77 0.01
412_L 51_N 0.77 0.01
205_I 47_C 0.77 0.01
210_W 51_N 0.77 0.01
89_W 53_L 0.77 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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