GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
CHPB - CHPS
UniProt: P33647 - P08365
Length: 199
Sequences: 190
Seq/Len: 0.97
I_Prob: 0.51

CHPB - mRNA interferase ChpB
Paralog alert: 0.39 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: CHPB MAZF
CHPS - Antitoxin ChpS
Paralog alert: 0.39 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CHPS MAZE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
109_L 50_Y 1.87 0.51
63_F 52_L 1.81 0.47
48_V 72_W 1.53 0.26
13_V 10_N 1.29 0.13
25_Q 8_W 1.19 0.09
9_R 29_G 1.18 0.09
61_A 63_A 1.17 0.09
75_H 32_V 1.13 0.07
78_V 18_N 1.12 0.07
81_N 69_Q 1.11 0.07
32_A 8_W 1.08 0.06
47_L 77_P 1.07 0.06
81_N 63_A 1.06 0.06
41_N 55_L 1.06 0.06
64_S 67_S 1.06 0.06
78_V 31_S 1.06 0.06
84_R 72_W 1.05 0.06
21_S 41_L 1.05 0.06
43_L 83_W 1.04 0.05
12_I 25_N 1.04 0.05
25_Q 11_S 1.04 0.05
35_L 14_M 1.03 0.05
64_S 63_A 1.03 0.05
110_R 50_Y 1.00 0.05
106_E 3_I 1.00 0.05
51_I 29_G 0.99 0.04
36_S 20_V 0.98 0.04
88_L 63_A 0.97 0.04
35_L 41_L 0.97 0.04
107_A 58_Q 0.96 0.04
20_A 60_D 0.96 0.04
16_G 32_V 0.96 0.04
89_H 16_I 0.96 0.04
40_F 72_W 0.95 0.04
110_R 55_L 0.94 0.04
95_R 28_P 0.94 0.04
11_D 30_Q 0.94 0.04
76_G 17_P 0.93 0.03
59_R 63_A 0.93 0.03
63_F 59_C 0.93 0.03
44_G 77_P 0.92 0.03
14_L 16_I 0.92 0.03
78_V 40_Q 0.91 0.03
42_Q 43_L 0.91 0.03
86_M 76_T 0.90 0.03
86_M 6_K 0.88 0.03
46_T 13_G 0.88 0.03
17_F 41_L 0.87 0.03
30_R 11_S 0.87 0.03
12_I 12_A 0.87 0.03
98_L 35_Q 0.86 0.03
88_L 60_D 0.85 0.02
11_D 76_T 0.85 0.02
27_G 11_S 0.85 0.02
35_L 80_D 0.85 0.02
32_A 10_N 0.85 0.02
61_A 60_D 0.84 0.02
84_R 60_D 0.84 0.02
77_V 24_L 0.84 0.02
14_L 41_L 0.83 0.02
47_L 55_L 0.83 0.02
64_S 12_A 0.82 0.02
28_A 5_I 0.82 0.02
62_G 63_A 0.82 0.02
18_D 32_V 0.81 0.02
109_L 18_N 0.81 0.02
39_A 53_D 0.81 0.02
104_V 43_L 0.81 0.02
94_K 20_V 0.80 0.02
99_A 34_A 0.80 0.02
37_V 52_L 0.80 0.02
49_A 1_M 0.80 0.02
96_I 13_G 0.80 0.02
63_F 56_L 0.79 0.02
59_R 67_S 0.79 0.02
45_M 30_Q 0.79 0.02
59_R 64_A 0.79 0.02
36_S 37_S 0.78 0.02
78_V 37_S 0.78 0.02
62_G 69_Q 0.78 0.02
76_G 54_E 0.78 0.02
75_H 29_G 0.78 0.02
109_L 33_E 0.78 0.02
39_A 51_S 0.78 0.02
106_E 61_M 0.77 0.02
20_A 67_S 0.77 0.02
33_L 2_R 0.77 0.02
18_D 20_V 0.77 0.02
48_V 59_C 0.77 0.02
74_V 16_I 0.77 0.02
22_G 54_E 0.76 0.02
61_A 67_S 0.76 0.02
32_A 15_V 0.76 0.02
87_D 79_G 0.76 0.01
33_L 77_P 0.75 0.01
101_D 54_E 0.75 0.01
108_L 6_K 0.75 0.01
59_R 60_D 0.75 0.01
65_V 55_L 0.75 0.01
104_V 3_I 0.75 0.01
97_G 72_W 0.74 0.01
86_M 14_M 0.74 0.01
60_Y 60_D 0.74 0.01
15_V 57_A 0.74 0.01
98_L 1_M 0.74 0.01
60_Y 67_S 0.73 0.01
99_A 46_I 0.73 0.01
89_H 80_D 0.73 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0324 seconds.