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YADG - YADH
UniProt: P36879 - P0AFN6
Length: 564
Sequences: 2982
Seq/Len: 5.44
I_Prob: 0.94

YADG - Uncharacterized ABC transporter ATP-binding protein YadG
Paralog alert: 0.89 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: ARTP BTUD CCMA CYSA DDPD DDPF DPPD DPPF FBPC FECE FEPC FHUC FTSE GLNQ GLTL HISP LIVF LIVG LOLD LPTB MALK METN MLAF MODC NIKD NIKE OPPD OPPF PHNC PHNK PHNL POTA POTG PROV PSTB SAPD SAPF SSUB SUFC TAUB THIQ UGPC YADG YBBA YBBL YCJV YDCT YECC YEHX YHDZ YNJD ZNUC
YADH - Inner membrane transport permease YadH
Paralog alert: 0.74 [within 20: 0.25] - ratio of genomes with paralogs
Cluster includes: YADH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
97_Q 22_R 1.68 0.94
49_G 93_E 1.63 0.93
106_Y 99_P 1.39 0.84
90_N 15_K 1.19 0.70
97_Q 18_H 1.16 0.68
82_L 97_V 1.15 0.67
104_G 14_A 1.12 0.64
149_R 94_E 1.07 0.57
107_G 8_A 0.79 0.26
147_I 34_T 0.78 0.25
146_M 94_E 0.77 0.24
91_P 89_Q 0.74 0.21
142_K 185_G 0.73 0.20
110_R 147_V 0.71 0.18
92_F 161_G 0.67 0.16
14_Y 20_F 0.66 0.15
270_S 239_A 0.63 0.13
84_P 93_E 0.63 0.12
157_L 205_N 0.62 0.12
52_S 93_E 0.62 0.12
10_L 242_L 0.62 0.12
256_A 204_L 0.61 0.12
271_V 240_F 0.61 0.12
159_I 168_D 0.61 0.12
124_L 94_E 0.61 0.12
102_Q 94_E 0.61 0.12
167_V 15_K 0.61 0.11
90_N 86_A 0.61 0.11
29_E 140_V 0.60 0.11
130_R 188_F 0.60 0.11
33_F 188_F 0.59 0.10
100_V 14_A 0.59 0.10
94_T 22_R 0.58 0.10
152_M 167_F 0.58 0.10
59_S 115_A 0.58 0.10
54_L 97_V 0.58 0.09
93_E 15_K 0.57 0.09
170_E 78_N 0.57 0.09
92_F 23_I 0.57 0.09
92_F 19_R 0.57 0.09
64_V 7_V 0.56 0.09
206_I 217_G 0.56 0.09
8_Q 231_G 0.56 0.09
104_G 104_V 0.56 0.09
104_G 11_S 0.56 0.09
87_F 58_Y 0.56 0.09
8_Q 239_A 0.56 0.09
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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