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YIAM - YIAN
UniProt: P37674 - P37675
Length: 582
Sequences: 2198
Seq/Len: 3.91
I_Prob: 1.00

YIAM - 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM
Paralog alert: 0.59 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: YIAM
YIAN - 2,3-diketo-L-gulonate TRAP transporter large permease protein YiaN
Paralog alert: 0.62 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: YIAN
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
21_F 246_F 3.42 1.00
91_I 25_L 2.86 1.00
42_R 52_D 1.82 0.97
14_A 268_L 1.53 0.93
87_L 26_L 1.42 0.89
59_D 273_K 1.42 0.89
17_S 245_A 1.38 0.87
28_Y 234_L 1.31 0.84
43_Y 48_V 1.28 0.82
10_A 268_L 1.24 0.79
64_Q 17_G 1.21 0.76
56_A 276_S 1.19 0.75
9_L 272_A 1.19 0.75
46_V 52_D 1.16 0.72
13_L 271_A 1.11 0.67
50_F 51_A 1.10 0.66
95_L 47_L 1.06 0.62
46_V 51_A 1.04 0.60
10_A 269_I 1.04 0.60
88_I 22_W 1.03 0.59
49_T 275_T 1.01 0.57
84_T 18_L 1.00 0.55
20_V 54_F 0.99 0.54
61_A 273_K 0.99 0.54
52_G 272_A 0.98 0.52
53_A 276_S 0.97 0.52
41_S 57_L 0.96 0.50
10_A 265_W 0.94 0.48
17_S 246_F 0.93 0.47
137_L 187_L 0.92 0.46
53_A 280_F 0.91 0.43
24_I 243_V 0.90 0.43
127_P 255_I 0.89 0.41
83_V 16_I 0.89 0.41
75_A 394_R 0.88 0.40
45_F 279_M 0.86 0.38
50_F 336_V 0.86 0.38
75_A 257_R 0.86 0.38
75_A 325_I 0.85 0.36
56_A 277_V 0.85 0.36
66_T 276_S 0.79 0.30
13_L 272_A 0.79 0.30
68_L 15_A 0.78 0.28
58_M 288_S 0.76 0.27
52_G 276_S 0.76 0.26
43_Y 52_D 0.75 0.25
17_S 64_L 0.75 0.25
16_L 57_L 0.74 0.24
86_S 206_M 0.74 0.24
137_L 128_S 0.74 0.24
89_L 132_P 0.73 0.23
83_V 18_L 0.73 0.23
8_I 260_T 0.72 0.22
135_F 112_V 0.71 0.21
48_L 275_T 0.70 0.20
54_I 24_L 0.70 0.20
57_F 102_M 0.70 0.20
132_I 138_G 0.69 0.19
72_L 16_I 0.68 0.18
57_F 22_W 0.68 0.18
127_P 214_V 0.68 0.18
86_S 409_V 0.68 0.18
88_I 18_L 0.68 0.18
62_H 277_V 0.67 0.18
45_F 54_F 0.67 0.17
104_I 184_T 0.67 0.17
124_A 48_V 0.67 0.17
132_I 22_W 0.66 0.17
75_A 262_A 0.66 0.16
50_F 47_L 0.66 0.16
14_A 264_L 0.66 0.16
23_N 147_A 0.65 0.16
34_I 251_V 0.65 0.16
100_T 191_W 0.65 0.16
63_V 281_L 0.64 0.15
8_I 183_A 0.64 0.15
66_T 390_D 0.64 0.15
86_S 266_H 0.63 0.14
129_S 396_V 0.63 0.14
93_G 386_K 0.63 0.14
93_G 176_A 0.63 0.14
49_T 51_A 0.63 0.14
123_A 59_I 0.63 0.14
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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