GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
MLAB - YRBA
UniProt: P64602 - P0A9W6
Length: 181
Sequences: 130
Seq/Len: 0.72
I_Prob: 0.06

MLAB - Probable phospholipid ABC transporter-binding protein MlaB
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: MLAB
YRBA - Uncharacterized protein YrbA
Paralog alert: 0.81 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: BOLA YRBA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
78_N 48_T 1.73 0.06
53_G 70_Y 1.61 0.04
25_L 79_R 1.60 0.04
43_D 5_E 1.49 0.03
49_R 45_K 1.42 0.03
63_D 32_A 1.40 0.02
60_H 74_E 1.38 0.02
60_H 45_K 1.31 0.02
56_A 59_D 1.30 0.02
78_N 22_S 1.29 0.02
42_I 73_A 1.27 0.02
32_R 18_E 1.23 0.01
36_V 45_K 1.21 0.01
77_V 2_E 1.21 0.01
16_L 31_I 1.19 0.01
89_N 45_K 1.19 0.01
95_L 5_E 1.18 0.01
89_N 74_E 1.16 0.01
76_G 80_K 1.15 0.01
83_T 23_G 1.14 0.01
49_R 74_E 1.12 0.01
63_D 69_A 1.10 0.01
15_A 55_E 1.09 0.01
69_G 34_G 1.08 0.01
48_S 39_G 1.07 0.01
9_Q 39_G 1.06 0.01
2_S 36_L 1.04 0.01
44_L 70_Y 1.04 0.01
53_G 20_H 1.03 0.01
89_N 76_A 1.02 0.01
52_T 73_A 1.00 0.01
47_V 48_T 0.99 0.01
72_V 3_N 0.99 0.01
64_L 65_V 0.99 0.01
55_L 25_G 0.98 0.01
72_V 69_A 0.98 0.01
49_R 13_A 0.98 0.01
17_S 22_S 0.98 0.01
32_R 2_E 0.97 0.01
90_L 61_R 0.97 0.01
30_E 70_Y 0.96 0.01
55_L 49_V 0.96 0.01
59_L 66_S 0.96 0.01
14_L 29_Q 0.95 0.01
4_S 70_Y 0.95 0.01
17_S 2_E 0.95 0.01
68_Q 69_A 0.94 0.01
68_Q 66_S 0.94 0.01
97_R 76_A 0.94 0.01
22_Q 47_Q 0.93 0.01
85_A 35_E 0.93 0.01
8_M 21_V 0.93 0.01
3_E 36_L 0.92 0.01
24_V 39_G 0.92 0.01
47_V 21_V 0.91 0.01
11_G 39_G 0.91 0.01
28_L 13_A 0.91 0.01
60_H 13_A 0.91 0.01
89_N 3_N 0.91 0.01
84_L 44_K 0.90 0.01
84_L 47_Q 0.90 0.01
81_V 57_I 0.90 0.01
89_N 58_A 0.90 0.01
59_L 34_G 0.89 0.01
72_V 17_Q 0.89 0.01
79_D 19_V 0.89 0.01
21_D 66_S 0.88 0.00
80_K 65_V 0.88 0.00
25_L 3_N 0.87 0.00
47_V 58_A 0.87 0.00
58_L 30_V 0.86 0.00
87_L 71_T 0.86 0.00
70_N 32_A 0.85 0.00
53_G 8_S 0.84 0.00
23_D 12_N 0.84 0.00
4_S 32_A 0.84 0.00
34_E 32_A 0.84 0.00
60_H 80_K 0.84 0.00
30_E 12_N 0.84 0.00
7_W 79_R 0.84 0.00
76_G 83_G 0.84 0.00
46_R 19_V 0.84 0.00
24_V 69_A 0.83 0.00
25_L 59_D 0.83 0.00
91_P 2_E 0.83 0.00
78_N 29_Q 0.83 0.00
56_A 83_G 0.83 0.00
2_S 76_A 0.83 0.00
72_V 15_S 0.83 0.00
4_S 19_V 0.83 0.00
9_Q 38_D 0.82 0.00
84_L 50_Y 0.82 0.00
83_T 60_N 0.82 0.00
48_S 55_E 0.82 0.00
4_S 76_A 0.82 0.00
90_L 35_E 0.81 0.00
47_V 51_G 0.81 0.00
71_N 82_N 0.80 0.00
74_L 78_D 0.80 0.00
8_M 37_F 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0297 seconds.