GREMLIN.BAKERLAB.org
Powered by OPENSEQ.org
MLAD - MLAE
UniProt: P64604 - P64606
Length: 443
Sequences: 572
Seq/Len: 1.39
I_Prob: 0.93

MLAD - Probable phospholipid ABC transporter-binding protein MlaD
Paralog alert: 0.07 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: MLAD
MLAE - Probable phospholipid ABC transporter permease protein MlaE
Paralog alert: 0.24 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: MLAE
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
14_L 13_G 2.06 0.93
14_L 24_G 1.66 0.76
8_I 6_L 1.51 0.65
58_V 6_L 1.51 0.65
65_V 219_F 1.49 0.63
86_I 37_F 1.39 0.53
10_V 69_V 1.35 0.50
15_L 9_L 1.23 0.37
15_L 6_L 1.20 0.34
99_L 51_V 1.17 0.32
111_Y 137_V 1.17 0.31
7_E 14_I 1.16 0.30
35_R 197_M 1.15 0.29
7_E 25_L 1.14 0.29
16_A 182_S 1.14 0.29
18_L 120_I 1.14 0.28
83_T 200_V 1.14 0.28
157_D 125_A 1.13 0.28
12_I 6_L 1.12 0.27
8_I 7_A 1.12 0.27
35_R 4_N 1.11 0.26
97_S 120_I 1.11 0.26
16_A 37_F 1.09 0.25
84_L 71_G 1.06 0.22
117_G 52_G 1.04 0.21
86_I 161_I 1.04 0.20
19_L 31_L 1.04 0.20
93_I 178_K 1.03 0.20
42_L 207_V 1.03 0.20
74_D 246_V 1.02 0.19
83_T 6_L 1.00 0.18
12_I 44_L 0.99 0.17
73_L 150_A 0.99 0.17
145_D 220_N 0.98 0.17
157_D 12_K 0.98 0.17
141_M 199_L 0.98 0.17
14_L 14_I 0.98 0.16
68_V 204_I 0.98 0.16
2_Q 220_N 0.97 0.16
60_I 126_T 0.96 0.15
83_T 185_F 0.96 0.15
133_T 13_G 0.95 0.14
77_T 132_M 0.95 0.14
49_I 153_I 0.95 0.14
35_R 129_L 0.94 0.14
148_G 213_V 0.94 0.14
109_E 102_V 0.94 0.14
27_K 59_I 0.94 0.14
72_T 245_A 0.93 0.13
33_S 212_T 0.93 0.13
114_L 134_M 0.93 0.13
15_L 17_L 0.92 0.13
157_D 5_A 0.92 0.13
2_Q 171_S 0.92 0.12
36_T 15_K 0.91 0.12
15_L 136_A 0.91 0.12
157_D 4_N 0.91 0.12
65_V 248_G 0.90 0.12
110_Q 181_D 0.90 0.12
25_C 189_M 0.90 0.12
84_L 7_A 0.90 0.11
157_D 8_S 0.89 0.11
36_T 228_S 0.89 0.11
15_L 213_V 0.89 0.11
99_L 199_L 0.89 0.11
35_R 157_L 0.89 0.11
19_L 42_P 0.89 0.11
13_F 105_A 0.89 0.11
3_T 182_S 0.88 0.11
15_L 252_V 0.88 0.11
10_V 45_V 0.88 0.11
86_I 14_I 0.88 0.10
28_A 68_M 0.88 0.10
77_T 242_S 0.88 0.10
40_Y 100_G 0.87 0.10
35_R 228_S 0.87 0.10
57_P 135_M 0.87 0.10
152_Y 218_L 0.87 0.10
141_M 84_E 0.87 0.10
36_T 13_G 0.87 0.10
134_I 11_H 0.87 0.10
105_G 239_V 0.87 0.10
117_G 55_S 0.87 0.10
140_A 135_M 0.87 0.10
88_Q 22_R 0.86 0.10
106_L 184_F 0.86 0.10
153_G 199_L 0.86 0.10
10_V 148_F 0.86 0.10
156_G 12_K 0.86 0.10
3_T 131_S 0.86 0.10
25_C 202_C 0.86 0.10
34_I 197_M 0.86 0.10
134_I 167_I 0.86 0.10
1_M 202_C 0.85 0.10
53_K 87_L 0.85 0.10
114_L 218_L 0.85 0.10
1_M 76_L 0.85 0.10
102_R 85_T 0.85 0.09
19_L 145_S 0.85 0.09
16_A 41_A 0.85 0.09
47_D 153_I 0.85 0.09
40_Y 216_I 0.85 0.09
154_S 150_A 0.84 0.09
99_L 26_M 0.84 0.09
83_T 246_V 0.84 0.09
35_R 6_L 0.84 0.09
38_P 51_V 0.84 0.09
146_L 93_L 0.84 0.09
100_S 246_V 0.84 0.09
16_A 56_M 0.84 0.09
65_V 211_I 0.83 0.09
40_Y 102_V 0.83 0.09
88_Q 20_F 0.83 0.09
21_A 229_A 0.83 0.09
91_N 13_G 0.83 0.09
112_L 172_L 0.83 0.08
84_L 54_L 0.83 0.08
89_R 132_M 0.82 0.08
113_A 71_G 0.82 0.08
99_L 82_S 0.82 0.08
20_A 216_I 0.82 0.08
63_V 78_L 0.82 0.08
58_V 9_L 0.82 0.08
1_M 71_G 0.82 0.08
71_I 32_V 0.82 0.08
90_Y 207_V 0.82 0.08
106_L 63_G 0.82 0.08
34_I 16_T 0.82 0.08
40_Y 156_P 0.82 0.08
132_D 31_L 0.81 0.08
130_D 259_G 0.81 0.08
117_G 69_V 0.81 0.08
112_L 6_L 0.81 0.08
96_T 20_F 0.81 0.08
32_T 214_T 0.81 0.08
97_S 19_T 0.81 0.08
28_A 124_R 0.81 0.08
154_S 76_L 0.81 0.08
89_R 41_A 0.81 0.08
130_D 8_S 0.81 0.08
36_T 16_T 0.81 0.08
129_K 160_V 0.81 0.07
156_G 259_G 0.80 0.07
115_N 184_F 0.80 0.07
28_A 53_V 0.80 0.07
114_L 81_Y 0.80 0.07
91_N 15_K 0.80 0.07
112_L 233_R 0.80 0.07
75_P 25_L 0.79 0.07
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.0235 seconds.