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RNFB - RNFD
UniProt: P77223 - P76182
Length: 544
Sequences: 465
Seq/Len: 0.87
I_Prob: 0.01

RNFB - Electron transport complex protein RnfB
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RNFB
RNFD - Electron transport complex protein RnfD
Paralog alert: 0.32 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: RNFD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
87_E 184_S 1.49 0.01
18_F 326_F 1.35 0.01
92_E 273_H 1.29 0.00
142_V 91_P 1.23 0.00
9_A 33_A 1.21 0.00
26_S 66_K 1.20 0.00
28_R 292_T 1.19 0.00
55_P 321_P 1.18 0.00
70_K 303_F 1.18 0.00
86_A 330_L 1.16 0.00
55_P 304_G 1.13 0.00
20_A 29_V 1.12 0.00
111_V 302_I 1.12 0.00
54_Y 304_G 1.12 0.00
7_A 291_V 1.11 0.00
92_E 52_V 1.09 0.00
161_C 135_F 1.09 0.00
140_H 121_F 1.07 0.00
13_L 89_I 1.06 0.00
8_V 67_Q 1.04 0.00
35_P 127_G 1.03 0.00
25_A 76_N 1.03 0.00
64_I 284_F 1.02 0.00
11_V 329_L 1.02 0.00
13_L 313_L 1.01 0.00
35_P 242_W 1.01 0.00
13_L 258_L 1.00 0.00
5_W 103_V 0.99 0.00
7_A 135_F 0.99 0.00
67_N 335_V 0.99 0.00
29_F 108_I 0.98 0.00
116_N 323_G 0.98 0.00
25_A 269_A 0.97 0.00
164_L 238_K 0.97 0.00
84_K 192_F 0.97 0.00
68_G 7_S 0.97 0.00
78_G 326_F 0.95 0.00
48_Q 113_Y 0.95 0.00
51_Q 54_A 0.95 0.00
177_D 152_I 0.94 0.00
81_V 100_L 0.94 0.00
26_S 28_A 0.94 0.00
37_V 142_W 0.92 0.00
41_D 303_F 0.92 0.00
23_G 238_K 0.92 0.00
54_Y 246_L 0.92 0.00
146_L 233_W 0.91 0.00
29_F 104_F 0.91 0.00
51_Q 320_Y 0.91 0.00
168_A 60_L 0.91 0.00
40_I 29_V 0.91 0.00
15_G 161_V 0.91 0.00
16_L 251_T 0.90 0.00
21_I 127_G 0.90 0.00
184_R 169_S 0.90 0.00
55_P 284_F 0.89 0.00
139_M 253_A 0.89 0.00
107_R 136_P 0.89 0.00
48_Q 125_M 0.88 0.00
173_S 26_L 0.88 0.00
17_A 229_A 0.88 0.00
53_G 80_L 0.88 0.00
140_H 312_W 0.87 0.00
15_G 152_I 0.87 0.00
41_D 290_P 0.86 0.00
84_K 11_T 0.86 0.00
21_I 105_A 0.86 0.00
23_G 129_V 0.86 0.00
19_G 339_D 0.86 0.00
133_V 67_Q 0.86 0.00
7_A 304_G 0.86 0.00
76_P 325_A 0.85 0.00
23_G 321_P 0.85 0.00
160_H 108_I 0.85 0.00
70_K 330_L 0.85 0.00
149_G 111_Q 0.85 0.00
28_R 295_T 0.84 0.00
155_D 334_T 0.84 0.00
27_R 57_A 0.84 0.00
11_V 320_Y 0.84 0.00
7_A 307_A 0.84 0.00
16_L 255_C 0.84 0.00
142_V 229_A 0.84 0.00
116_N 10_Y 0.84 0.00
15_G 301_L 0.84 0.00
89_L 333_I 0.83 0.00
67_N 235_L 0.83 0.00
14_L 112_L 0.83 0.00
60_Y 325_A 0.83 0.00
9_A 13_N 0.82 0.00
39_K 260_W 0.82 0.00
16_L 83_L 0.82 0.00
97_D 154_G 0.82 0.00
99_E 70_A 0.82 0.00
84_K 66_K 0.82 0.00
18_F 329_L 0.82 0.00
185_I 82_G 0.82 0.00
9_A 112_L 0.82 0.00
55_P 318_G 0.82 0.00
69_E 335_V 0.82 0.00
38_E 335_V 0.82 0.00
163_S 250_V 0.81 0.00
85_I 310_L 0.81 0.00
76_P 130_V 0.81 0.00
54_Y 211_Y 0.81 0.00
35_P 17_T 0.81 0.00
142_V 341_Y 0.81 0.00
151_N 31_G 0.81 0.00
126_A 226_A 0.81 0.00
185_I 158_A 0.81 0.00
35_P 136_P 0.81 0.00
122_K 339_D 0.81 0.00
59_P 290_P 0.81 0.00
18_F 314_I 0.80 0.00
76_P 339_D 0.80 0.00
116_N 296_T 0.80 0.00
137_R 6_A 0.80 0.00
181_I 331_A 0.80 0.00
26_S 303_F 0.79 0.00
23_G 344_P 0.79 0.00
24_Y 89_I 0.79 0.00
175_K 221_Q 0.79 0.00
40_I 262_F 0.79 0.00
134_G 93_A 0.79 0.00
59_P 303_F 0.79 0.00
93_P 246_L 0.79 0.00
60_Y 339_D 0.79 0.00
68_G 348_G 0.79 0.00
35_P 121_F 0.78 0.00
100_A 70_A 0.78 0.00
178_L 279_T 0.78 0.00
167_V 330_L 0.78 0.00
124_I 276_S 0.78 0.00
173_S 156_I 0.77 0.00
25_A 93_A 0.77 0.00
152_L 238_K 0.77 0.00
1_M 295_T 0.77 0.00
86_A 343_R 0.77 0.00
26_S 269_A 0.77 0.00
77_G 288_T 0.77 0.00
43_I 101_G 0.77 0.00
39_K 248_F 0.77 0.00
184_R 150_V 0.77 0.00
99_E 158_A 0.77 0.00
78_G 325_A 0.77 0.00
16_L 221_Q 0.77 0.00
187_P 82_G 0.76 0.00
36_V 116_L 0.76 0.00
186_I 48_L 0.76 0.00
76_P 121_F 0.76 0.00
166_P 319_G 0.76 0.00
124_I 326_F 0.76 0.00
27_R 211_Y 0.76 0.00
42_E 237_Q 0.76 0.00
167_V 121_F 0.76 0.00
76_P 291_V 0.76 0.00
161_C 290_P 0.76 0.00
78_G 113_Y 0.76 0.00
18_F 129_V 0.76 0.00
87_E 292_T 0.75 0.00
59_P 135_F 0.75 0.00
173_S 149_A 0.75 0.00
69_E 69_V 0.75 0.00
152_L 290_P 0.75 0.00
96_L 320_Y 0.75 0.00
59_P 65_R 0.75 0.00
55_P 134_S 0.75 0.00
2_N 36_L 0.75 0.00
14_L 129_V 0.74 0.00
151_N 334_T 0.74 0.00
162_I 230_G 0.74 0.00
17_A 309_L 0.74 0.00
185_I 169_S 0.74 0.00
15_G 72_T 0.74 0.00
140_H 333_I 0.74 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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