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CCMD - Heme exporter protein D
UniProt: P0ABM5 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG12169
Length: 69 (67)
Sequences: 248
Seq/Len: 3.70

CCMD
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
8_W 12_F 4.06 1.00
19_F 23_L 2.097 1.00
12_F 18_A 1.74 0.99
5_F 56_R 1.64 0.99
53_Q 67_E 1.466 0.97
35_L 39_S 1.45 0.96
58_A 62_A 1.378 0.95
40_V 44_R 1.37 0.94
4_A 53_Q 1.315 0.93
32_L 44_R 1.309 0.93
5_F 35_L 1.306 0.92
25_V 46_I 1.3 0.92
23_L 57_E 1.268 0.91
3_P 6_A 1.262 0.91
30_I 34_V 1.221 0.89
5_F 39_S 1.221 0.89
20_F 49_G 1.214 0.88
10_E 27_M 1.212 0.88
16_G 20_F 1.186 0.87
10_E 13_A 1.175 0.86
23_L 35_L 1.168 0.86
28_T 42_Q 1.161 0.85
15_G 23_L 1.137 0.83
49_G 56_R 1.137 0.83
11_F 15_G 1.129 0.83
26_V 29_V 1.119 0.82
26_V 39_S 1.115 0.82
39_S 46_I 1.087 0.79
24_A 47_L 1.081 0.79
44_R 51_A 1.079 0.79
34_V 58_A 1.066 0.78
52_Q 55_A 1.044 0.75
43_H 51_A 1.038 0.75
5_F 23_L 1.037 0.75
58_A 67_E 1.026 0.74
7_S 13_A 1.02 0.73
37_V 52_Q 1.008 0.72
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
4i5sA20.869610.30.899Contact Map0.125
1v8kA10.44938.60.903Contact Map
4lepA217.40.906Contact Map0.187
4sbvA30.463860.909Contact Map
2ww8A10.59425.40.911Contact Map0
2kncB10.84065.30.912Contact Map0.026
4ei7A20.9133.60.918Contact Map0.099
3rkoJ20.9713.30.92Contact Map0.119
3w4tA10.78263.20.92Contact Map0.123
2l16A10.76813.10.921Contact Map0.222

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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