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BEEE - Putative protein BeeE from lambdoid prophage e14 region
UniProt: P75980 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG14253
Length: 157 (146)
Sequences: 167
Seq/Len: 1.14

BEEE
Paralog alert: 0.09 [within 20: 0.01] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
55_L 108_C 2.726 1.00
107_L 113_F 2.111 0.98
58_S 61_M 2.013 0.97
68_H 75_Q 1.963 0.96
118_V 126_E 1.962 0.96
99_F 115_A 1.866 0.94
60_G 97_Q 1.854 0.94
100_W 106_C 1.84 0.94
82_L 124_V 1.801 0.93
33_T 37_I 1.76 0.92
68_H 79_G 1.625 0.87
58_S 62_L 1.478 0.79
80_E 113_F 1.468 0.78
87_S 100_W 1.458 0.77
60_G 101_E 1.435 0.76
93_Y 100_W 1.431 0.76
96_P 100_W 1.427 0.75
50_S 60_G 1.404 0.74
105_T 109_L 1.378 0.72
51_C 90_P 1.364 0.70
94_M 130_V 1.342 0.69
106_C 132_P 1.284 0.64
90_P 112_N 1.269 0.62
119_K 124_V 1.258 0.61
117_K 124_V 1.252 0.61
90_P 95_T 1.25 0.61
60_G 74_K 1.248 0.60
100_W 104_V 1.246 0.60
87_S 96_P 1.242 0.60
93_Y 128_L 1.223 0.58
129_P 137_Y 1.22 0.58
4_S 9_R 1.22 0.58
46_T 51_C 1.206 0.56
55_L 104_V 1.202 0.56
83_H 87_S 1.196 0.56
127_L 132_P 1.196 0.56
67_Y 83_H 1.185 0.54
86_I 129_P 1.183 0.54
93_Y 139_L 1.18 0.54
21_L 31_T 1.175 0.54
117_K 127_L 1.169 0.53
103_V 115_A 1.166 0.53
53_R 57_E 1.164 0.52
94_M 99_F 1.163 0.52
106_C 129_P 1.152 0.51
52_V 109_L 1.143 0.50
3_F 13_A 1.141 0.50
38_S 72_S 1.136 0.50
60_G 108_C 1.133 0.50
31_T 46_T 1.132 0.49
2_F 5_G 1.131 0.49
105_T 130_V 1.13 0.49
99_F 112_N 1.127 0.49
112_N 132_P 1.115 0.48
3_F 6_L 1.104 0.47
55_L 107_L 1.096 0.46
47_A 64_C 1.093 0.46
49_F 54_V 1.088 0.45
60_G 115_A 1.086 0.45
99_F 127_L 1.075 0.44
97_Q 101_E 1.07 0.43
8_Q 12_D 1.063 0.43
69_L 73_L 1.052 0.42
94_M 112_N 1.05 0.42
56_A 91_N 1.039 0.41
55_L 93_Y 1.039 0.41
90_P 99_F 1.037 0.40
37_I 41_R 1.036 0.40
3_F 7_F 1.034 0.40
110_R 114_Y 1.032 0.40
1_M 7_F 1.026 0.39
71_G 144_R 1.026 0.39
26_G 35_K 1.022 0.39
15_V 18_P 1.02 0.39
106_C 113_F 1.016 0.38
82_L 100_W 1.003 0.37
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results: GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
PDB Chains Cov P(%) HHΔ   Acc
3kdrA30.732599.90.533Contact Map0.458
3aoeE40.42682.20.965Contact Map0.25
1hr0W10.35672.10.965Contact Map0.075
3pegA10.40761.90.966Contact Map0.286
2d73A20.35031.80.966Contact Map0.003
3jywS10.21021.80.966Contact Map0
1jlxA20.35031.60.967Contact Map0.201
3lqcA10.61151.50.968Contact Map0.078
2a1kA20.40131.30.969Contact Map0
2kfpA10.40761.30.969Contact Map0.233

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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